Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate dehydrogenase | PIGHUM_00512 | Not Available | Negative | 557992 - 558954 | 34696.0 |
| nadp-dependent malic enzyme | PIGHUM_00513 | Not Available | Negative | 559093 - 560358 | 44968.4 |
| hypothetical protein | PIGHUM_00514 | Not Available | Positive | 560629 - 562491 | 65868.5 |
| 3-oxoadipate enol-lactonase 2 | PIGHUM_00515 | Not Available | Negative | 562586 - 563764 | 42846.2 |
| 3-carboxy-cis,cis-muconate cycloisomerase | PIGHUM_00516 | Not Available | Negative | 563767 - 565128 | 47467.1 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00517 | Not Available | Positive | 565393 - 566373 | 34478.6 |
| hca operon transcriptional activator | PIGHUM_00518 | Not Available | Negative | 566386 - 567285 | 32647.7 |
| glutamyl-trna(gln) amidotransferase subunit a | PIGHUM_00519 | Not Available | Positive | 567363 - 568631 | 44338.8 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00520 | Not Available | Negative | 568963 - 569967 | 34933.4 |
| l-aspartate dehydrogenase | PIGHUM_00521 | Not Available | Negative | 570226 - 571032 | 27596.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
