Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-halobenzoate 1,2-dioxygenase large subunit | PIGHUM_00462 | Not Available | Positive | 502367 - 503710 | 49961.1 |
| anthranilate 1,2-dioxygenase small subunit | PIGHUM_00463 | Not Available | Positive | 503710 - 504207 | 18854.4 |
| benzoate 1,2-dioxygenase electron transfer component | PIGHUM_00464 | Not Available | Positive | 504219 - 505217 | 35708.6 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00465 | Not Available | Positive | 505280 - 506275 | 35278.9 |
| hth-type transcriptional regulator gltc | PIGHUM_00466 | Not Available | Positive | 506328 - 507575 | 44629.5 |
| cupin domain protein | PIGHUM_00467 | Not Available | Positive | 507985 - 508965 | 36424.0 |
| d-arabitol-phosphate dehydrogenase | PIGHUM_00468 | Not Available | Positive | 509002 - 510111 | 38977.3 |
| creatinase | PIGHUM_00469 | Not Available | Positive | 510135 - 511430 | 46732.9 |
| putative methyltransferase ycgj | PIGHUM_00470 | Not Available | Negative | 511460 - 512239 | 28085.3 |
| aspartate racemase | PIGHUM_00471 | Not Available | Negative | 512313 - 513023 | 25039.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
