Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PIGHUM_00442 | Not Available | Positive | 482877 - 483413 | 19832.7 |
| hth-type transcriptional regulator benm | PIGHUM_00443 | Not Available | Negative | 483429 - 484352 | 33438.2 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | PIGHUM_00444 | Not Available | Positive | 484543 - 485202 | 23290.0 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | PIGHUM_00445 | Not Available | Positive | 485228 - 485908 | 23777.3 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | PIGHUM_00446 | Not Available | Positive | 485908 - 486552 | 21936.3 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00447 | Not Available | Negative | 486572 - 487561 | 34948.6 |
| manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase | PIGHUM_00448 | Not Available | Negative | 487756 - 488316 | 21189.0 |
| ureidoglycolate lyase | PIGHUM_00449 | Not Available | Negative | 488372 - 489301 | 33318.9 |
| putative hth-type transcriptional regulator ydfh | PIGHUM_00450 | Not Available | Positive | 489647 - 490300 | 24061.1 |
| maleate isomerase | PIGHUM_00451 | Not Available | Positive | 490423 - 491238 | 28634.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
