Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome c oxidase subunit ccop | PIGHUM_00422 | Not Available | Negative | 459001 - 459927 | 33995.3 |
| cbb3-type cytochrome oxidase component fixq | PIGHUM_00423 | Not Available | Negative | 459924 - 460100 | 6111.37 |
| cytochrome c oxidase, mono-heme subunit/fixo | PIGHUM_00424 | Not Available | Negative | 460104 - 460742 | 23705.3 |
| hypothetical protein | PIGHUM_00425 | Not Available | Negative | 460756 - 462228 | 55102.8 |
| cytochrome oxidase maturation protein cbb3-type | PIGHUM_00426 | Not Available | Negative | 462309 - 462503 | 6817.01 |
| putative copper-importing p-type atpase a | PIGHUM_00427 | Not Available | Negative | 462503 - 464869 | 82995.2 |
| chromosomal replication initiator protein dnaa | PIGHUM_00428 | Not Available | Positive | 465184 - 466713 | 56374.5 |
| dna polymerase iii subunit beta | PIGHUM_00429 | Not Available | Positive | 466957 - 468063 | 40733.3 |
| dna gyrase subunit b | PIGHUM_00430 | Not Available | Positive | 468345 - 470855 | 92341.9 |
| hth-type transcriptional regulator kipr | PIGHUM_00431 | Not Available | Positive | 471112 - 471873 | 27355.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
