Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase | PIGHUM_00332 | Not Available | Negative | 349346 - 350209 | 30711.9 |
| protocatechuate 4,5-dioxygenase beta chain | PIGHUM_00333 | Not Available | Negative | 350264 - 351403 | 40394.9 |
| carboxymethylenebutenolidase | PIGHUM_00334 | Not Available | Negative | 351406 - 352164 | 27616.6 |
| acetophenone carboxylase delta subunit | PIGHUM_00335 | Not Available | Negative | 352176 - 354362 | 78335.5 |
| acetophenone carboxylase gamma subunit | PIGHUM_00336 | Not Available | Negative | 354379 - 356472 | 74634.0 |
| atp-dependent dna helicase rep | PIGHUM_00337 | Not Available | Negative | 356674 - 358806 | 79536.9 |
| primosomal protein n' | PIGHUM_00338 | Not Available | Negative | 358806 - 361037 | 81061.4 |
| uroporphyrinogen decarboxylase | PIGHUM_00339 | Not Available | Negative | 361415 - 362488 | 38756.5 |
| hth-type transcriptional regulator dmlr | PIGHUM_00340 | Not Available | Positive | 363129 - 364028 | 33070.0 |
| hypothetical protein | PIGHUM_00341 | Not Available | Negative | 364112 - 364840 | 26580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
