Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid transport atp-binding protein livf | PIGHUM_00242 | Not Available | Negative | 259072 - 259779 | 25419.3 |
| lipopolysaccharide export system atp-binding protein lptb | PIGHUM_00243 | Not Available | Negative | 259772 - 260536 | 27432.5 |
| leucine/isoleucine/valine transporter permease subunit | PIGHUM_00244 | Not Available | Negative | 260533 - 261549 | 35932.0 |
| high-affinity branched-chain amino acid transport system permease protein livh | PIGHUM_00245 | Not Available | Negative | 261549 - 262373 | 29141.0 |
| aliphatic amidase expression-regulating protein | PIGHUM_00246 | Not Available | Negative | 262533 - 263708 | 41625.9 |
| hth-type transcriptional repressor csir | PIGHUM_00247 | Not Available | Negative | 263808 - 264593 | 28790.7 |
| ammonia channel precursor | PIGHUM_00248 | Not Available | Negative | 264779 - 266107 | 45874.7 |
| nitrogen regulatory protein p-ii | PIGHUM_00249 | Not Available | Negative | 266121 - 266459 | 12399.2 |
| bacterial protein of unknown function (gcw_chp) | PIGHUM_00250 | Not Available | Negative | 266517 - 267239 | 26174.4 |
| membrane fusogenic activity | PIGHUM_00251 | Not Available | Positive | 267503 - 267769 | 10076.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
