Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Esterase/lipase | PIGHUM_04424 | Not Available | Positive | 4782977 - 4783831 | 31686.1 |
| hypothetical protein | PIGHUM_04425 | Not Available | Positive | 4783828 - 4784268 | 16209.2 |
| Ssra-binding protein | PIGHUM_04426 | Not Available | Negative | 4784321 - 4784776 | 17647.5 |
| Type ii toxin-antitoxin system toxin rata | PIGHUM_04427 | Not Available | Positive | 4784856 - 4785287 | 16188.4 |
| Rnfh family protein | PIGHUM_04428 | Not Available | Positive | 4785280 - 4785621 | 12292.5 |
| Orf012 | PIGHUM_04429 | Not Available | Positive | 4785761 - 4787221 | 52201.1 |
| gmp synthase | PIGHUM_04430 | Not Available | Positive | 4787289 - 4788920 | 59217.3 |
| Putative integrase | PIGHUM_04431 | Not Available | Positive | 4789222 - 4790469 | 47194.0 |
| Putative transcriptional regulator | PIGHUM_04432 | Not Available | Negative | 4790411 - 4790689 | 10559.6 |
| C-5 cytosine-specific dna methylase | PIGHUM_04433 | Not Available | Negative | 4790769 - 4792769 | 72235.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
