Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-o major subunit precursor | PIGHUM_00150 | Not Available | Positive | 161013 - 161603 | 21380.7 |
| formate dehydrogenase-o major subunit precursor | PIGHUM_00151 | Not Available | Positive | 161652 - 164081 | 90730.8 |
| formate dehydrogenase-o iron-sulfur subunit | PIGHUM_00152 | Not Available | Positive | 164092 - 164991 | 32936.2 |
| formate dehydrogenase, cytochrome b556(fdo) subunit | PIGHUM_00153 | Not Available | Positive | 164984 - 165622 | 24866.0 |
| formate dehydrogenase accessory protein fdhe | PIGHUM_00154 | Not Available | Positive | 166101 - 167030 | 33667.3 |
| l-seryl-trna(sec) selenium transferase | PIGHUM_00155 | Not Available | Positive | 167023 - 168441 | 50926.4 |
| selenide, water dikinase | PIGHUM_00158 | Not Available | Positive | 170616 - 171674 | 36252.7 |
| drug efflux system protein mdtg | PIGHUM_00159 | Not Available | Positive | 171775 - 172974 | 41569.7 |
| autoinducer 2 sensor kinase/phosphatase luxq | PIGHUM_00160 | Not Available | Positive | 173084 - 174673 | 57729.3 |
| high-affinity choline transport protein | PIGHUM_00161 | Not Available | Negative | 174719 - 176668 | 71361.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
