Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Alcaligenaceae
Genus
Pigmentiphaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Alcaligenaceae |
| Genus | Pigmentiphaga |
| Species | Pigmentiphaga humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848102 bp
Thymine Count
848000 bp
Guanine Count
1704798 bp
Cytosine Count
1718013 bp
Genome Length
5118913 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin fitb | PIGHUM_00949 | Not Available | Negative | 1029034 - 1029390 | 12642.3 |
| exodeoxyribonuclease | PIGHUM_00950 | Not Available | Positive | 1029451 - 1030248 | 30219.5 |
| 2-hydroxymuconate semialdehyde hydrolase | PIGHUM_00951 | Not Available | Negative | 1030344 - 1031192 | 31017.0 |
| hypothetical protein | PIGHUM_00952 | Not Available | Negative | 1031189 - 1031635 | 16482.0 |
| gallate dioxygenase | PIGHUM_00953 | Not Available | Negative | 1031635 - 1032576 | 34766.8 |
| hth-type transcriptional repressor csir | PIGHUM_00954 | Not Available | Negative | 1032636 - 1033301 | 24860.8 |
| terephthalate 1,2-dioxygenase, terminal oxygenase component subunit alpha 2 | PIGHUM_00955 | Not Available | Positive | 1033519 - 1034709 | 45001.3 |
| salicylate 5-hydroxylase, small oxygenase component | PIGHUM_00956 | Not Available | Positive | 1034706 - 1035188 | 17658.0 |
| tripartite tricarboxylate transporter family receptor | PIGHUM_00957 | Not Available | Positive | 1035239 - 1036210 | 34486.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PIGHUM_00958 | Not Available | Positive | 1036222 - 1036998 | 27443.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
