Halocella sp. SP3-1

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Halanaerobiales

Family

Halanaerobiaceae

Genus

Halocella

Description

Halocella sp. SP3-1 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication dynamics. The strain is cataloged under the accession NZ_CP032760.1, indicating its presence in genomic databases and availability for further research. Halocella sp. is known to thrive in extreme environments, particularly saline conditions, which is a common trait among members of the Halocella genus. This adaptation to high salinity suggests potential biochemical pathways and mechanisms that allow for cellular function and survival under osmotic stress. The single replicon structure may also imply a streamlined genomic architecture that could contribute to the organism's efficiency in resource utilization within its niche. The ecological role of Halocella sp. SP3-1 is likely tied to its ability to degrade organic materials and contribute to nutrient cycling in saline habitats. Such microorganisms play a critical role in maintaining ecosystem balance, particularly in extreme environments where fewer organisms can thrive. Their metabolic capabilities not only assist in breaking down complex organic compounds but may also influence the overall microbial community structure in their habitats. In summary, Halocella sp. SP3-1, with its unique genomic characteristics and ecological adaptations, exemplifies the resilience and functional diversity of microorganisms in extreme environments. Understanding its traits can provide insights into microbial ecology and the potential biotechnological applications of extremophiles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderHalanaerobiales
FamilyHalanaerobiaceae
GenusHalocella
SpeciesHalocella sp. SP3-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halocella sp. SP3-1 chromosome, complete genome.

Gene Summary

Adenine Count

1307307 bp

Thymine Count

1312299 bp

Guanine Count

709964 bp

Cytosine Count

706190 bp

Genome Length

4035760 bp

Protein-coding Genes

3812 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c4-dicarboxylate trap transporter substrate-binding proteinD7D81_RS01330Not AvailableNegative286268 - 28726036022.6
nickel-dependent lactate racemaseD7D81_RS01335Not AvailableNegative287643 - 28889646582.5
response regulatorD7D81_RS01340Not AvailableNegative289393 - 28975213027.9
m23 family metallopeptidaseD7D81_RS01345Not AvailableNegative289848 - 29093640651.5
duf5107 domain-containing proteinD7D81_RS01350Not AvailableNegative291099 - 29202535289.9
duf5107 domain-containing proteinD7D81_RS01355Not AvailableNegative292055 - 295390129382.0
is110 family transposaseD7D81_RS01360Not AvailablePositive295706 - 29695047044.9
arac family transcriptional regulatorD7D81_RS01365Not AvailablePositive297107 - 29806037108.1
l-arabinose abc transporter permease arahD7D81_RS01370Not AvailableNegative298395 - 29935433712.6
l-arabinose abc transporter atp-binding protein aragD7D81_RS01375Not AvailableNegative299389 - 30087955143.5

Displaying genes 421 – 430 of 3969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.