Halocella sp. SP3-1

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Halanaerobiales

Family

Halanaerobiaceae

Genus

Halocella

Description

Halocella sp. SP3-1 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication dynamics. The strain is cataloged under the accession NZ_CP032760.1, indicating its presence in genomic databases and availability for further research. Halocella sp. is known to thrive in extreme environments, particularly saline conditions, which is a common trait among members of the Halocella genus. This adaptation to high salinity suggests potential biochemical pathways and mechanisms that allow for cellular function and survival under osmotic stress. The single replicon structure may also imply a streamlined genomic architecture that could contribute to the organism's efficiency in resource utilization within its niche. The ecological role of Halocella sp. SP3-1 is likely tied to its ability to degrade organic materials and contribute to nutrient cycling in saline habitats. Such microorganisms play a critical role in maintaining ecosystem balance, particularly in extreme environments where fewer organisms can thrive. Their metabolic capabilities not only assist in breaking down complex organic compounds but may also influence the overall microbial community structure in their habitats. In summary, Halocella sp. SP3-1, with its unique genomic characteristics and ecological adaptations, exemplifies the resilience and functional diversity of microorganisms in extreme environments. Understanding its traits can provide insights into microbial ecology and the potential biotechnological applications of extremophiles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderHalanaerobiales
FamilyHalanaerobiaceae
GenusHalocella
SpeciesHalocella sp. SP3-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halocella sp. SP3-1 chromosome, complete genome.

Gene Summary

Adenine Count

1307307 bp

Thymine Count

1312299 bp

Guanine Count

709964 bp

Cytosine Count

706190 bp

Genome Length

4035760 bp

Protein-coding Genes

3812 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal abc transporter solute-binding protein, zn/mn familyD7D81_RS15790Not AvailableNegative3315336 - 331626534346.7
metal-dependent transcriptional regulatorD7D81_RS15795Not AvailableNegative3316265 - 331694826435.0
hypothetical proteinD7D81_RS15800Not AvailableNegative3317107 - 331818941122.3
outer membrane lipoprotein-sorting proteinD7D81_RS15805Not AvailableNegative3318280 - 331905329790.6
efflux rnd transporter permease subunitD7D81_RS15810Not AvailableNegative3319065 - 332135684268.1
marr family winged helix-turn-helix transcriptional regulatorD7D81_RS15815Not AvailableNegative3321563 - 332198816754.5
energy-coupling factor abc transporter atp-binding proteinD7D81_RS15820Not AvailableNegative3322214 - 332285524508.9
cobalt ecf transporter t component cbiqD7D81_RS15825Not AvailableNegative3322852 - 332361329269.0
hypothetical proteinD7D81_RS15830Not AvailableNegative3323613 - 332419421562.4
cobalt transporter cbimD7D81_RS15835Not AvailableNegative3324175 - 332480122458.6

Displaying genes 3351 – 3360 of 3969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.