Halocella sp. SP3-1

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Halanaerobiales

Family

Halanaerobiaceae

Genus

Halocella

Description

Halocella sp. SP3-1 is characterized by having a single replicon, which is significant in understanding its genomic organization and replication dynamics. The strain is cataloged under the accession NZ_CP032760.1, indicating its presence in genomic databases and availability for further research. Halocella sp. is known to thrive in extreme environments, particularly saline conditions, which is a common trait among members of the Halocella genus. This adaptation to high salinity suggests potential biochemical pathways and mechanisms that allow for cellular function and survival under osmotic stress. The single replicon structure may also imply a streamlined genomic architecture that could contribute to the organism's efficiency in resource utilization within its niche. The ecological role of Halocella sp. SP3-1 is likely tied to its ability to degrade organic materials and contribute to nutrient cycling in saline habitats. Such microorganisms play a critical role in maintaining ecosystem balance, particularly in extreme environments where fewer organisms can thrive. Their metabolic capabilities not only assist in breaking down complex organic compounds but may also influence the overall microbial community structure in their habitats. In summary, Halocella sp. SP3-1, with its unique genomic characteristics and ecological adaptations, exemplifies the resilience and functional diversity of microorganisms in extreme environments. Understanding its traits can provide insights into microbial ecology and the potential biotechnological applications of extremophiles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderHalanaerobiales
FamilyHalanaerobiaceae
GenusHalocella
SpeciesHalocella sp. SP3-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halocella sp. SP3-1 chromosome, complete genome.

Gene Summary

Adenine Count

1307307 bp

Thymine Count

1312299 bp

Guanine Count

709964 bp

Cytosine Count

706190 bp

Genome Length

4035760 bp

Protein-coding Genes

3812 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD7D81_RS15045Not AvailableNegative3127124 - 31273609242.97
iron-containing alcohol dehydrogenaseD7D81_RS15050Not AvailableNegative3127508 - 312865041891.1
nicotinate phosphoribosyltransferaseD7D81_RS15055Not AvailableNegative3128846 - 313028854802.8
lytr/algr family response regulator transcription factorD7D81_RS15060Not AvailableNegative3130404 - 313118630219.8
lyts/yhck type 5tm receptor domain-containing proteinD7D81_RS15065Not AvailableNegative3131394 - 313307961732.0
carbon starvation protein aD7D81_RS15070Not AvailablePositive3133502 - 313492050356.0
gfo/idh/moca family proteinD7D81_RS15075Not AvailableNegative3135135 - 313629243485.4
sugar phosphate isomerase/epimerase family proteinD7D81_RS15080Not AvailableNegative3136289 - 313721235641.3
cation-translocating p-type atpaseD7D81_RS15085Not AvailablePositive3137402 - 3140128101014.0
d-ribose pyranaseD7D81_RS15090Not AvailableNegative3140192 - 314059014823.2

Displaying genes 3201 – 3210 of 3969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.