Butyrivibrio sp. XB500-5

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Butyrivibrio

Description

Butyrivibrio sp. XB500-5 is a bacterial strain characterized by the presence of flagella, which suggests motility in its environment. This trait is significant as motility can influence the organism's ability to locate nutrients and colonize specific ecological niches. The strain has a single replicon, indicating a relatively straightforward genomic organization, which may contribute to its adaptability and metabolic efficiency. The accession number associated with Butyrivibrio sp. XB500-5 is RAIS00000000.1, providing a reference point for genetic and genomic studies related to this strain. The availability of such genomic data can enhance understanding of its biological functions and potential applications in various fields, including agriculture and biotechnology. Ecologically, Butyrivibrio species are known for their role in the fermentation process within the gastrointestinal tracts of ruminants, contributing to the breakdown of complex carbohydrates and the production of short-chain fatty acids, particularly butyrate. This metabolic capability is crucial for the health of host animals, as butyrate serves as an important energy source for intestinal cells and plays a role in maintaining gut health. In summary, Butyrivibrio sp. XB500-5, with its flagella and unique genomic characteristics, exemplifies the adaptive strategies of bacteria in complex ecosystems, particularly in symbiotic relationships where they aid in nutrient digestion and metabolic processes in ruminants.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusButyrivibrio
SpeciesButyrivibrio sp. XB500-5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Butyrivibrio sp. XB500-5 NODE_3101_length_307_cov_776.022, whole

Gene Summary

Adenine Count

925266 bp

Thymine Count

959612 bp

Guanine Count

657114 bp

Cytosine Count

731781 bp

Genome Length

3273773 bp

Protein-coding Genes

2944 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-2D6856_01690Not AvailableNegative376567 - 379392103145.0
50s ribosomal protein l7aeD6856_01695Not AvailableNegative379379 - 37969611297.8
ylxr family proteinD6856_01700Not AvailableNegative379728 - 3799889724.93
transcription termination/antitermination protein nusaD6856_01705Not AvailableNegative379990 - 38117744154.6
ribosome maturation factor rimpD6856_01710Not AvailableNegative381202 - 38166617419.5
Trna-gluNot AvailableNot AvailablePositive381909 - 381980Not Available
carbon-nitrogen hydrolase family proteinD6856_01720Not AvailablePositive382195 - 38296528986.3
polc-type dna polymerase iiiD6856_01725Not AvailableNegative383009 - 387538170137.0
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseD6856_01730Not AvailableNegative387568 - 38862637549.9
rip metalloprotease rsepD6856_01735Not AvailableNegative388670 - 38972239347.4

Displaying genes 341 – 350 of 2993 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.