Yersinia hibernica str. CFS1934

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia hibernica str. CFS1934 is a rod-shaped bacterium characterized by the presence of flagella, which suggests potential motility. This strain contains two replicons, indicating a dual plasmid system that may contribute to its genetic adaptability and metabolic versatility. The genome of Yersinia hibernica str. CFS1934 has been sequenced and is accessible under the accession numbers NZ_CP032488.1 and NZ_CP032487.1. As a member of the Yersinia genus, Yersinia hibernica is closely related to other pathogenic species, though specific pathogenicity traits of this strain require further investigation. The presence of flagella may play a role in its environmental interactions, possibly aiding in colonization or movement within various ecological niches. Understanding the genetic structure and mobility of Yersinia hibernica str. CFS1934 can provide insights into its ecological role, particularly in relation to its environmental persistence and potential interactions with other microorganisms. The dual replicon system may enhance its adaptability, allowing it to thrive in diverse habitats. This adaptability can influence microbial community dynamics and may have implications for public health, particularly in understanding the ecology of Yersinia species in relation to human and animal health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia hibernica
StrainCFS1934

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia hibernica str. CFS1934
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia hibernica strain CFS1934 plasmid pCFS1934, complete

Gene Summary

Adenine Count

15551 bp

Thymine Count

15600 bp

Guanine Count

14883 bp

Cytosine Count

14462 bp

Genome Length

60496 bp

Protein-coding Genes

57 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase-associated protein rapaD5F51_RS03770Not AvailableNegative782279 - 785185110176.0
dna polymerase iiD5F51_RS03775Not AvailableNegative785455 - 78782790964.5
deda family proteinD5F51_RS03780Not AvailablePositive788017 - 78878428940.6
thiamine abc transporter atp-binding protein thiqD5F51_RS03785Not AvailableNegative788789 - 78949325947.8
thiamine/thiamine pyrophosphate abc transporter permease thipD5F51_RS03790Not AvailableNegative789480 - 79108759435.4
thiamine abc transporter substrate binding subunitD5F51_RS03795Not AvailableNegative791063 - 79205236711.9
hth-type transcriptional regulator sgrrD5F51_RS03800Not AvailableNegative792268 - 79392964560.8
glycyl-radical enzyme activating proteinD5F51_RS03805Not AvailablePositive794055 - 79495433301.0
formate c-acetyltransferase/glycerol dehydratase family glycyl radical enzymeD5F51_RS03810Not AvailablePositive794959 - 79739190483.8
sugar efflux transporterD5F51_RS03815Not AvailablePositive797650 - 79883142704.1

Displaying genes 981 – 990 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.