Yersinia hibernica str. CFS1934

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia hibernica str. CFS1934 is a rod-shaped bacterium characterized by the presence of flagella, which suggests potential motility. This strain contains two replicons, indicating a dual plasmid system that may contribute to its genetic adaptability and metabolic versatility. The genome of Yersinia hibernica str. CFS1934 has been sequenced and is accessible under the accession numbers NZ_CP032488.1 and NZ_CP032487.1. As a member of the Yersinia genus, Yersinia hibernica is closely related to other pathogenic species, though specific pathogenicity traits of this strain require further investigation. The presence of flagella may play a role in its environmental interactions, possibly aiding in colonization or movement within various ecological niches. Understanding the genetic structure and mobility of Yersinia hibernica str. CFS1934 can provide insights into its ecological role, particularly in relation to its environmental persistence and potential interactions with other microorganisms. The dual replicon system may enhance its adaptability, allowing it to thrive in diverse habitats. This adaptability can influence microbial community dynamics and may have implications for public health, particularly in understanding the ecology of Yersinia species in relation to human and animal health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia hibernica
StrainCFS1934

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia hibernica str. CFS1934
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia hibernica strain CFS1934 plasmid pCFS1934, complete

Gene Summary

Adenine Count

15551 bp

Thymine Count

15600 bp

Guanine Count

14883 bp

Cytosine Count

14462 bp

Genome Length

60496 bp

Protein-coding Genes

57 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l33D5F51_RS00335Not AvailablePositive74041 - 742086357.91
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseD5F51_RS00340Not AvailablePositive74295 - 7510430181.5
pantetheine-phosphate adenylyltransferaseD5F51_RS00345Not AvailableNegative75185 - 7566417575.5
glycosyltransferase family 2 proteinD5F51_RS00350Not AvailableNegative75661 - 7644329427.1
lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferaseD5F51_RS00355Not AvailableNegative76444 - 7772147606.5
lipopolysaccharide heptosyltransferase rfacD5F51_RS00360Not AvailableNegative78257 - 7922235746.1
adp-heptose--lps heptosyltransferase rfafD5F51_RS00365Not AvailableNegative79222 - 8028639479.8
adp-glyceromanno-heptose 6-epimeraseD5F51_RS00370Not AvailableNegative80317 - 8124934763.6
glycine c-acetyltransferaseD5F51_RS00375Not AvailablePositive81494 - 8270543939.7
l-threonine 3-dehydrogenaseD5F51_RS00380Not AvailablePositive82715 - 8374037309.2

Displaying genes 371 – 380 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.