Roseovarius spongiae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Roseovarius

Description

Roseovarius spongiae is a Gram-negative bacterium. It is characterized by possessing a single replicon, which is significant in its genetic makeup and replication process. The organism has been documented in the genomic database with the accession number RAPE00000000.1, indicating its availability for further research and analysis. As a member of the Roseovarius genus, Roseovarius spongiae is likely to be involved in marine ecosystems, particularly in association with sponges. Bacteria from the Roseovarius genus are known for their potential roles in nutrient cycling and their interactions with marine invertebrates. These interactions can play a crucial part in the health and stability of marine environments, as sponges often serve as habitat and nutrient sources for various marine organisms. The specific traits of Roseovarius spongiae, including its Gram-negative classification and unique genomic features, suggest that it may possess specialized adaptations to thrive in its ecological niche. Understanding the genetic and ecological roles of Roseovarius spongiae can contribute to broader insights into microbial diversity in marine habitats and the functional relationships between microorganisms and their host organisms. This knowledge may inform conservation efforts and the management of marine ecosystems in the face of environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRoseovarius
SpeciesRoseovarius spongiae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseovarius spongiae strain HN-E21 contig16, whole genome shotgun

Gene Summary

Adenine Count

682905 bp

Thymine Count

681177 bp

Guanine Count

1357766 bp

Cytosine Count

1331706 bp

Genome Length

4053554 bp

Protein-coding Genes

3719 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrite reductase, copper-containingD6850_01000Not AvailablePositive213895 - 21511243845.9
formylglycine-generating enzyme family proteinD6850_01005Not AvailablePositive215192 - 21595026716.7
5s ribosomal rnaNot AvailableNot AvailablePositive216883 - 216997Not Available
formimidoylglutamate deiminaseD6850_01010Not AvailableNegative215956 - 21731448415.3
imidazolonepropionaseD6850_01015Not AvailablePositive217410 - 21862442677.2
histidine ammonia-lyaseD6850_01020Not AvailablePositive218618 - 22015052636.1
n-formylglutamate deformylaseD6850_01025Not AvailablePositive220147 - 22094728863.0
urocanate hydrataseD6850_01030Not AvailablePositive220944 - 22261460790.1
hypothetical proteinD6850_01035Not AvailableNegative222875 - 22350121716.9
utra domain-containing proteinD6850_01040Not AvailableNegative223625 - 22431425805.7

Displaying genes 221 – 230 of 3781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.