Parabacteroides sp. CH2-D42-20

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. CH2-D42-20 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in its environment. This species is identified by a single replicon, indicating a streamlined genomic structure that can have implications for its replication and cellular function. The genomic data for this organism can be referenced under the accession number RAYG00000000.1. In the context of microbial ecology, the presence of flagella in Parabacteroides sp. CH2-D42-20 suggests that it may play a role in navigating its environment, potentially influencing its interactions with other microorganisms or the host. The rod shape and motility could contribute to its ability to colonize specific niches within a microbiome, allowing it to effectively exploit available resources. Understanding the traits of this bacterium, particularly its mobility and genetic organization, may provide insights into its ecological roles and potential applications in biotechnology or health-related fields.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. CH2-D42-20
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. CH2-D42-20 Scaffold95_1, whole genome shotgun

Gene Summary

Adenine Count

1421810 bp

Thymine Count

1409985 bp

Guanine Count

1147460 bp

Cytosine Count

1171003 bp

Genome Length

5158047 bp

Protein-coding Genes

4161 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
doxx family proteinD7V92_19800Not AvailablePositive4724089 - 472537248517.5
triose-phosphate isomeraseD7V92_19805Not AvailablePositive4725409 - 472616426445.6
spor domain-containing proteinD7V92_19810Not AvailablePositive4726235 - 472674119329.7
gtp cyclohydrolase i foleD7V92_19815Not AvailablePositive4726744 - 472733722934.1
serpin family proteinD7V92_19820Not AvailablePositive4727520 - 472877947379.1
type ii toxin-antitoxin system yafq family toxinD7V92_19825Not AvailableNegative4728776 - 472904810612.8
hypothetical proteinD7V92_19830Not AvailableNegative4729052 - 47292527554.44
tonb-dependent receptorD7V92_19835Not AvailablePositive4730085 - 473224481583.9
histidine kinaseD7V92_19840Not AvailablePositive4732265 - 473332342023.4
dna-binding response regulatorD7V92_19845Not AvailablePositive4733320 - 473401526506.2

Displaying genes 3841 – 3850 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.