Parabacteroides sp. CH2-D42-20

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. CH2-D42-20 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in its environment. This species is identified by a single replicon, indicating a streamlined genomic structure that can have implications for its replication and cellular function. The genomic data for this organism can be referenced under the accession number RAYG00000000.1. In the context of microbial ecology, the presence of flagella in Parabacteroides sp. CH2-D42-20 suggests that it may play a role in navigating its environment, potentially influencing its interactions with other microorganisms or the host. The rod shape and motility could contribute to its ability to colonize specific niches within a microbiome, allowing it to effectively exploit available resources. Understanding the traits of this bacterium, particularly its mobility and genetic organization, may provide insights into its ecological roles and potential applications in biotechnology or health-related fields.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. CH2-D42-20
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. CH2-D42-20 Scaffold95_1, whole genome shotgun

Gene Summary

Adenine Count

1421810 bp

Thymine Count

1409985 bp

Guanine Count

1147460 bp

Cytosine Count

1171003 bp

Genome Length

5158047 bp

Protein-coding Genes

4161 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s41 family peptidaseD7V92_17590Not AvailablePositive4206999 - 420873263835.2
5-formyltetrahydrofolate cyclo-ligaseD7V92_17595Not AvailablePositive4208638 - 420919220890.6
duf721 domain-containing proteinD7V92_17600Not AvailableNegative4209302 - 420959511395.8
dna replication/repair protein recfD7V92_17605Not AvailableNegative4209598 - 421069542207.0
tetratricopeptide repeat proteinD7V92_17610Not AvailablePositive4210844 - 421152724849.6
6,7-dimethyl-8-ribityllumazine synthaseD7V92_17615Not AvailablePositive4211604 - 421208617487.8
Trna-tyrNot AvailableNot AvailablePositive4212141 - 4212226Not Available
Trna-glyNot AvailableNot AvailablePositive4212284 - 4212359Not Available
hypothetical proteinD7V92_17630Not AvailablePositive4212470 - 421280212455.5
hypothetical proteinD7V92_17635Not AvailableNegative4212812 - 42130127867.65

Displaying genes 3411 – 3420 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.