Parabacteroides sp. CH2-D42-20

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. CH2-D42-20 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in its environment. This species is identified by a single replicon, indicating a streamlined genomic structure that can have implications for its replication and cellular function. The genomic data for this organism can be referenced under the accession number RAYG00000000.1. In the context of microbial ecology, the presence of flagella in Parabacteroides sp. CH2-D42-20 suggests that it may play a role in navigating its environment, potentially influencing its interactions with other microorganisms or the host. The rod shape and motility could contribute to its ability to colonize specific niches within a microbiome, allowing it to effectively exploit available resources. Understanding the traits of this bacterium, particularly its mobility and genetic organization, may provide insights into its ecological roles and potential applications in biotechnology or health-related fields.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. CH2-D42-20
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. CH2-D42-20 Scaffold95_1, whole genome shotgun

Gene Summary

Adenine Count

1421810 bp

Thymine Count

1409985 bp

Guanine Count

1147460 bp

Cytosine Count

1171003 bp

Genome Length

5158047 bp

Protein-coding Genes

4161 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-leuNot AvailableNot AvailablePositive3850887 - 3850971Not Available
peptidase s41D7V92_16090Not AvailableNegative3851044 - 385206038967.7
duf3316 domain-containing proteinD7V92_16095Not AvailableNegative3852072 - 385294132359.9
dna gyrase/topoisomerase iv subunit aD7V92_16100Not AvailableNegative3852945 - 3855680104203.0
port family proteinD7V92_16105Not AvailablePositive3855899 - 385666628113.4
hypothetical proteinD7V92_16110Not AvailablePositive3857148 - 385758817341.3
hypothetical proteinD7V92_16115Not AvailableNegative3857725 - 385856432255.1
hypothetical proteinD7V92_16125Not AvailableNegative3859371 - 385964310923.0
glsb/yeaq/ymge family stress response membrane proteinD7V92_16130Not AvailablePositive3859914 - 38601718966.6
ytxh domain-containing proteinD7V92_16135Not AvailablePositive3860208 - 386050410630.8

Displaying genes 3121 – 3130 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.