Parabacteroides sp. CH2-D42-20

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. CH2-D42-20 is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in its environment. This species is identified by a single replicon, indicating a streamlined genomic structure that can have implications for its replication and cellular function. The genomic data for this organism can be referenced under the accession number RAYG00000000.1. In the context of microbial ecology, the presence of flagella in Parabacteroides sp. CH2-D42-20 suggests that it may play a role in navigating its environment, potentially influencing its interactions with other microorganisms or the host. The rod shape and motility could contribute to its ability to colonize specific niches within a microbiome, allowing it to effectively exploit available resources. Understanding the traits of this bacterium, particularly its mobility and genetic organization, may provide insights into its ecological roles and potential applications in biotechnology or health-related fields.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. CH2-D42-20
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. CH2-D42-20 Scaffold95_1, whole genome shotgun

Gene Summary

Adenine Count

1421810 bp

Thymine Count

1409985 bp

Guanine Count

1147460 bp

Cytosine Count

1171003 bp

Genome Length

5158047 bp

Protein-coding Genes

4161 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
o-antigen polysaccharide polymerase wzyD7V92_12640Not AvailablePositive3060185 - 306161855213.6
polysaccharide biosynthesis proteinD7V92_12645Not AvailablePositive3061648 - 306316257159.2
glycosyltransferaseD7V92_12650Not AvailablePositive3063230 - 306447749117.7
atp-grasp domain-containing proteinD7V92_12655Not AvailablePositive3064576 - 306575742783.2
sugar transferaseD7V92_12660Not AvailablePositive3065761 - 306636023359.3
atp-grasp domain-containing proteinD7V92_12665Not AvailablePositive3066360 - 306756544525.6
degt/dnrj/eryc1/strs family aminotransferaseD7V92_12670Not AvailablePositive3067614 - 306881344683.5
duf3810 domain-containing proteinD7V92_12675Not AvailablePositive3069401 - 307045040292.9
alpha-galactosidaseD7V92_12680Not AvailableNegative3070459 - 307266683831.8
isoleucine--trna ligaseD7V92_12685Not AvailablePositive3072892 - 3076314130269.0

Displaying genes 2451 – 2460 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.