Sphingomonas paeninsulae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas paeninsulae is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism possesses a single replicon, indicating that it has a streamlined genomic structure that is typical for many bacteria, allowing for efficient replication and cellular function. The genomic information for Sphingomonas paeninsulae can be found in the accession NZ_CP032829.1. In terms of its ecological role, Sphingomonas species are known to thrive in a variety of environments, often contributing to the biodegradation of complex organic compounds. This capability is significant in ecological contexts where the degradation of pollutants is necessary for environmental health. The ability of Sphingomonas paeninsulae to degrade such compounds can potentially make it a useful organism in bioremediation efforts. Overall, the traits of Sphingomonas paeninsulae highlight its adaptability and functional significance in microbial ecosystems, particularly in the context of environmental cleanup and the cycling of nutrients.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas paeninsulae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas paeninsulae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas paeninsulae strain YZ-8 chromosome, complete genome.

Gene Summary

Adenine Count

602577 bp

Thymine Count

600793 bp

Guanine Count

863557 bp

Cytosine Count

856237 bp

Genome Length

2923164 bp

Protein-coding Genes

2818 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseD3Y57_RS08400Not AvailablePositive624953 - 62533614528.8
Trna-lysNot AvailableNot AvailablePositive625360 - 625435Not Available
diguanylate cyclase domain-containing proteinD3Y57_RS21085Not AvailableNegative625456 - 6256777961.7
ggdef domain-containing proteinD3Y57_RS21090Not AvailableNegative625662 - 6258717519.04
hypothetical proteinD3Y57_RS08420Not AvailableNegative625862 - 62663527599.4
tonb-dependent receptor plug domain-containing proteinD3Y57_RS08425Not AvailablePositive627043 - 62895068387.5
abc transporter substrate-binding proteinD3Y57_RS08430Not AvailablePositive628953 - 62973527643.0
feccd family abc transporter permeaseD3Y57_RS08435Not AvailablePositive629732 - 63068532271.9
abc transporter atp-binding proteinD3Y57_RS08440Not AvailablePositive630694 - 63121218143.7
hypothetical proteinD3Y57_RS08445Not AvailablePositive631212 - 6314337550.06

Displaying genes 701 – 710 of 2938 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.