Sphingomonas paeninsulae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas paeninsulae is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism possesses a single replicon, indicating that it has a streamlined genomic structure that is typical for many bacteria, allowing for efficient replication and cellular function. The genomic information for Sphingomonas paeninsulae can be found in the accession NZ_CP032829.1. In terms of its ecological role, Sphingomonas species are known to thrive in a variety of environments, often contributing to the biodegradation of complex organic compounds. This capability is significant in ecological contexts where the degradation of pollutants is necessary for environmental health. The ability of Sphingomonas paeninsulae to degrade such compounds can potentially make it a useful organism in bioremediation efforts. Overall, the traits of Sphingomonas paeninsulae highlight its adaptability and functional significance in microbial ecosystems, particularly in the context of environmental cleanup and the cycling of nutrients.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas paeninsulae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas paeninsulae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas paeninsulae strain YZ-8 chromosome, complete genome.

Gene Summary

Adenine Count

602577 bp

Thymine Count

600793 bp

Guanine Count

863557 bp

Cytosine Count

856237 bp

Genome Length

2923164 bp

Protein-coding Genes

2818 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease rD3Y57_RS16575Not AvailableNegative2262865 - 226505179784.9
glycerol-3-phosphate dehydrogenaseD3Y57_RS16580Not AvailablePositive2265102 - 226661955358.6
glycerol kinase glpkD3Y57_RS16585Not AvailablePositive2266555 - 226802153375.4
2-hydroxyacid dehydrogenaseD3Y57_RS16590Not AvailableNegative2268025 - 226891831114.7
proline--trna ligaseD3Y57_RS16595Not AvailableNegative2268935 - 227046156237.7
dmt family transporterD3Y57_RS16600Not AvailablePositive2270527 - 227145033130.4
duf885 domain-containing proteinD3Y57_RS16605Not AvailablePositive2271485 - 227335666916.6
cytidine deaminaseD3Y57_RS16610Not AvailableNegative2273317 - 227374514800.7
upf0262 family proteinD3Y57_RS16615Not AvailableNegative2273747 - 227422918411.3
hlyd family secretion proteinD3Y57_RS16620Not AvailableNegative2274249 - 227535538532.2

Displaying genes 2361 – 2370 of 2938 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.