Sphingomonas paeninsulae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas paeninsulae is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism possesses a single replicon, indicating that it has a streamlined genomic structure that is typical for many bacteria, allowing for efficient replication and cellular function. The genomic information for Sphingomonas paeninsulae can be found in the accession NZ_CP032829.1. In terms of its ecological role, Sphingomonas species are known to thrive in a variety of environments, often contributing to the biodegradation of complex organic compounds. This capability is significant in ecological contexts where the degradation of pollutants is necessary for environmental health. The ability of Sphingomonas paeninsulae to degrade such compounds can potentially make it a useful organism in bioremediation efforts. Overall, the traits of Sphingomonas paeninsulae highlight its adaptability and functional significance in microbial ecosystems, particularly in the context of environmental cleanup and the cycling of nutrients.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas paeninsulae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas paeninsulae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas paeninsulae strain YZ-8 chromosome, complete genome.

Gene Summary

Adenine Count

602577 bp

Thymine Count

600793 bp

Guanine Count

863557 bp

Cytosine Count

856237 bp

Genome Length

2923164 bp

Protein-coding Genes

2818 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murein l,d-transpeptidase catalytic domain family proteinD3Y57_RS14840Not AvailableNegative1913682 - 191426921221.1
serine hydrolaseD3Y57_RS14845Not AvailableNegative1914316 - 191546441212.4
hypothetical proteinD3Y57_RS14850Not AvailableNegative1915461 - 191580512087.0
l,d-transpeptidase family proteinD3Y57_RS14855Not AvailableNegative1915802 - 191731354057.6
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataD3Y57_RS14860Not AvailablePositive1917513 - 191929664646.9
yaii/yqxd family proteinD3Y57_RS14865Not AvailablePositive1919320 - 191978116215.7
nad(p)/fad-dependent oxidoreductaseD3Y57_RS14870Not AvailablePositive1919875 - 192111643751.5
nad-dependent succinate-semialdehyde dehydrogenaseD3Y57_RS14875Not AvailablePositive1921113 - 192254951243.8
dna ligase dD3Y57_RS14880Not AvailableNegative1922554 - 192501990736.3
ku proteinD3Y57_RS14885Not AvailableNegative1925181 - 192605032130.8

Displaying genes 2011 – 2020 of 2938 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.