Sphingomonas paeninsulae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas paeninsulae is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism possesses a single replicon, indicating that it has a streamlined genomic structure that is typical for many bacteria, allowing for efficient replication and cellular function. The genomic information for Sphingomonas paeninsulae can be found in the accession NZ_CP032829.1. In terms of its ecological role, Sphingomonas species are known to thrive in a variety of environments, often contributing to the biodegradation of complex organic compounds. This capability is significant in ecological contexts where the degradation of pollutants is necessary for environmental health. The ability of Sphingomonas paeninsulae to degrade such compounds can potentially make it a useful organism in bioremediation efforts. Overall, the traits of Sphingomonas paeninsulae highlight its adaptability and functional significance in microbial ecosystems, particularly in the context of environmental cleanup and the cycling of nutrients.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas paeninsulae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas paeninsulae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas paeninsulae strain YZ-8 chromosome, complete genome.

Gene Summary

Adenine Count

602577 bp

Thymine Count

600793 bp

Guanine Count

863557 bp

Cytosine Count

856237 bp

Genome Length

2923164 bp

Protein-coding Genes

2818 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpxD3Y57_RS05595Not AvailablePositive42307 - 4357545750.2
3-phosphoshikimate 1-carboxyvinyltransferaseD3Y57_RS05600Not AvailablePositive43723 - 4497343669.5
amp nucleosidaseD3Y57_RS05605Not AvailableNegative45098 - 4654053579.4
peroxiredoxinD3Y57_RS05610Not AvailableNegative46612 - 4709416695.0
adenosylhomocysteinaseD3Y57_RS05615Not AvailablePositive47261 - 4867350866.9
pas domain-containing sensor histidine kinaseD3Y57_RS05620Not AvailablePositive48735 - 5101481096.9
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeD3Y57_RS05625Not AvailablePositive51014 - 5145415913.0
aminoglycoside phosphotransferase family proteinD3Y57_RS05630Not AvailablePositive51451 - 5242535982.9
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataD3Y57_RS05635Not AvailablePositive52422 - 5314326238.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataD3Y57_RS05640Not AvailablePositive53136 - 56056109223.0

Displaying genes 181 – 190 of 2938 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.