Sphingomonas paeninsulae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas paeninsulae is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility. This organism possesses a single replicon, indicating that it has a streamlined genomic structure that is typical for many bacteria, allowing for efficient replication and cellular function. The genomic information for Sphingomonas paeninsulae can be found in the accession NZ_CP032829.1. In terms of its ecological role, Sphingomonas species are known to thrive in a variety of environments, often contributing to the biodegradation of complex organic compounds. This capability is significant in ecological contexts where the degradation of pollutants is necessary for environmental health. The ability of Sphingomonas paeninsulae to degrade such compounds can potentially make it a useful organism in bioremediation efforts. Overall, the traits of Sphingomonas paeninsulae highlight its adaptability and functional significance in microbial ecosystems, particularly in the context of environmental cleanup and the cycling of nutrients.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas paeninsulae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas paeninsulae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas paeninsulae strain YZ-8 chromosome, complete genome.

Gene Summary

Adenine Count

602577 bp

Thymine Count

600793 bp

Guanine Count

863557 bp

Cytosine Count

856237 bp

Genome Length

2923164 bp

Protein-coding Genes

2818 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf445 domain-containing proteinD3Y57_RS10315Not AvailableNegative979829 - 98109145906.3
efflux rnd transporter permease subunitD3Y57_RS10320Not AvailableNegative981142 - 984243110501.0
efflux rnd transporter periplasmic adaptor subunitD3Y57_RS10325Not AvailableNegative984276 - 98546041054.3
glsb/yeaq/ymge family stress response membrane proteinD3Y57_RS10330Not AvailablePositive985667 - 9859278908.32
simpl domain-containing proteinD3Y57_RS10335Not AvailablePositive986095 - 98674522582.0
glsb/yeaq/ymge family stress response membrane proteinD3Y57_RS10340Not AvailableNegative986810 - 9870679003.58
duf1153 domain-containing proteinD3Y57_RS10345Not AvailableNegative987222 - 98752111124.5
hypothetical proteinD3Y57_RS10350Not AvailableNegative987626 - 9878959403.9
trna 2-thiouridine(34) synthase mnmaD3Y57_RS10355Not AvailablePositive987977 - 98909839404.2
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseD3Y57_RS10360Not AvailableNegative989147 - 98998029009.8

Displaying genes 1091 – 1100 of 2938 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.