Corallococcus sp. CA054B

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Corallococcus

Description

Corallococcus sp. CA054B is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can suggest a level of genetic stability, which may be advantageous for the organism’s adaptability in its ecological niche. The organism is cataloged under the accession number RAVY00000000.1, providing a reference point for further research and analysis. The relatively simple genomic architecture may facilitate the study of genetic functions and interactions within the species. The single replicon could also imply efficient replication processes, potentially allowing for rapid growth and reproduction under favorable environmental conditions. In terms of ecological significance, Corallococcus sp. is part of a larger group of microorganisms known for their roles in various biogeochemical cycles. While specific ecological interactions of Corallococcus sp. CA054B are not detailed in the provided data, organisms within the Corallococcus genus are often associated with decomposition processes and nutrient cycling within their habitats. They may contribute to the breakdown of organic matter, thus playing a crucial role in maintaining ecosystem health and function. In summary, Corallococcus sp. CA054B's genetic simplicity, as evidenced by its single replicon, may provide insights into its adaptability and ecological role, particularly in nutrient cycling and organic matter decomposition. Understanding these traits can enhance our knowledge of microbial contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusCorallococcus
SpeciesCorallococcus sp. CA054B
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallococcus sp. CA054B NODE_463_216_cov_13.0562_ID_10110, whole

Gene Summary

Adenine Count

1489899 bp

Thymine Count

1485649 bp

Guanine Count

3463990 bp

Cytosine Count

3470893 bp

Genome Length

9910431 bp

Protein-coding Genes

7921 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspdD7V80_25225Not AvailableNegative6206331 - 620893793149.5
general secretion pathway protein gspcD7V80_25230Not AvailableNegative6208966 - 620991034279.9
sigma-54-dependent fis family transcriptional regulatorD7V80_25235Not AvailableNegative6210081 - 621148750868.5
chromosome partitioning protein parbD7V80_25240Not AvailableNegative6211533 - 621254337083.7
tldd/pmba family proteinD7V80_25245Not AvailableNegative6212607 - 621395347514.5
metalloprotease tlddD7V80_25250Not AvailableNegative6213962 - 621535649366.0
4-amino-4-deoxy-l-arabinose transferaseD7V80_25255Not AvailableNegative6215583 - 621691748381.3
thioredoxin domain-containing proteinD7V80_25260Not AvailablePositive6217079 - 621916977185.3
transglutaminase domain-containing proteinD7V80_25265Not AvailableNegative6219198 - 622075156493.0
gnat family n-acetyltransferaseD7V80_25270Not AvailableNegative6220773 - 622124917817.2

Displaying genes 4891 – 4900 of 8005 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.