Corallococcus sp. CA054B

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Corallococcus

Description

Corallococcus sp. CA054B is characterized by having a single replicon, indicating a streamlined genomic structure. This trait can suggest a level of genetic stability, which may be advantageous for the organism’s adaptability in its ecological niche. The organism is cataloged under the accession number RAVY00000000.1, providing a reference point for further research and analysis. The relatively simple genomic architecture may facilitate the study of genetic functions and interactions within the species. The single replicon could also imply efficient replication processes, potentially allowing for rapid growth and reproduction under favorable environmental conditions. In terms of ecological significance, Corallococcus sp. is part of a larger group of microorganisms known for their roles in various biogeochemical cycles. While specific ecological interactions of Corallococcus sp. CA054B are not detailed in the provided data, organisms within the Corallococcus genus are often associated with decomposition processes and nutrient cycling within their habitats. They may contribute to the breakdown of organic matter, thus playing a crucial role in maintaining ecosystem health and function. In summary, Corallococcus sp. CA054B's genetic simplicity, as evidenced by its single replicon, may provide insights into its adaptability and ecological role, particularly in nutrient cycling and organic matter decomposition. Understanding these traits can enhance our knowledge of microbial contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusCorallococcus
SpeciesCorallococcus sp. CA054B
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallococcus sp. CA054B NODE_463_216_cov_13.0562_ID_10110, whole

Gene Summary

Adenine Count

1489899 bp

Thymine Count

1485649 bp

Guanine Count

3463990 bp

Cytosine Count

3470893 bp

Genome Length

9910431 bp

Protein-coding Genes

7921 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sh3 domain-containing proteinD7V80_25070Not AvailableNegative6167863 - 616877431922.8
ligase-associated dna damage response exonucleaseD7V80_25075Not AvailablePositive6168979 - 617000137450.3
atp-dependent dna ligaseD7V80_25080Not AvailablePositive6170005 - 617160360594.6
ligase-associated dna damage response dexh box helicaseD7V80_25085Not AvailablePositive6171590 - 617415195502.3
ligase-associated dna damage response endonuclease pdemD7V80_25090Not AvailablePositive6174121 - 617477423759.6
cytochrome cD7V80_25095Not AvailablePositive6175257 - 617591924476.2
4fe-4s dicluster domain-containing proteinD7V80_25100Not AvailablePositive6175916 - 6179131116255.0
hydrogenaseD7V80_25105Not AvailablePositive6179137 - 618057353673.6
duf3341 domain-containing proteinD7V80_25110Not AvailablePositive6180578 - 618112319510.4
cytochrome cD7V80_25115Not AvailablePositive6181120 - 618168020211.2

Displaying genes 4861 – 4870 of 8005 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.