Lichenibacterium ramalinae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Lichenihabitantaceae

Genus

Lichenibacterium

Description

Lichenibacterium ramalinae is a bacterial species characterized by possessing a single replicon, which indicates a streamlined genomic structure. The accession number for this species is QYBC00000000.1, providing a reference point for researchers looking to explore its genetic and functional attributes further. Lichenibacterium ramalinae is part of a broader ecological niche, often associated with lichenized fungi. This association suggests a potential role in the lichen symbiosis, possibly contributing to nutrient cycling or the degradation of organic matter. The unique relationship between Lichenibacterium ramalinae and its lichen hosts may highlight its ecological significance within these environments, although specific interactions and mechanisms remain to be fully elucidated. Understanding the genomic and ecological characteristics of Lichenibacterium ramalinae can provide insights into the complex dynamics of symbiotic relationships in lichens. Further research into this species may reveal its contributions to lichen health, stability, and resilience in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyLichenihabitantaceae
GenusLichenibacterium
SpeciesLichenibacterium ramalinae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lichenibacterium ramalinae strain RmlP001

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
antibiotic biosynthesis monooxygenaseD3272_11780Not AvailableNegative2552173 - 255254113049.7
nad-dependent epimerase/dehydratase family proteinD3272_11790Not AvailableNegative2553849 - 255472729930.7
tetr/acrr family transcriptional regulatorD3272_11795Not AvailablePositive2554811 - 255538920237.2
hypothetical proteinD3272_11800Not AvailableNegative2556092 - 25563048322.32
d-amino-acid transaminaseD3272_11805Not AvailableNegative2556431 - 255730930755.0
ethylammeline chlorohydrolaseD3272_11810Not AvailableNegative2557400 - 255882449514.4
asp/glu racemaseD3272_11815Not AvailableNegative2558847 - 255952122889.6
polysaccharide deacetylaseD3272_11820Not AvailableNegative2559518 - 256042333107.5
abc transporter substrate-binding proteinD3272_11825Not AvailableNegative2560410 - 256122528239.8
amino acid abc transporter atp-binding proteinD3272_11830Not AvailableNegative2561250 - 256199626739.6

Displaying genes 2331 – 2340 of 5287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.