Lichenibacterium ramalinae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Lichenihabitantaceae

Genus

Lichenibacterium

Description

Lichenibacterium ramalinae is a bacterial species characterized by possessing a single replicon, which indicates a streamlined genomic structure. The accession number for this species is QYBC00000000.1, providing a reference point for researchers looking to explore its genetic and functional attributes further. Lichenibacterium ramalinae is part of a broader ecological niche, often associated with lichenized fungi. This association suggests a potential role in the lichen symbiosis, possibly contributing to nutrient cycling or the degradation of organic matter. The unique relationship between Lichenibacterium ramalinae and its lichen hosts may highlight its ecological significance within these environments, although specific interactions and mechanisms remain to be fully elucidated. Understanding the genomic and ecological characteristics of Lichenibacterium ramalinae can provide insights into the complex dynamics of symbiotic relationships in lichens. Further research into this species may reveal its contributions to lichen health, stability, and resilience in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyLichenihabitantaceae
GenusLichenibacterium
SpeciesLichenibacterium ramalinae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lichenibacterium ramalinae strain RmlP001

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction resolvase ruvxD3272_10870Not AvailableNegative2352623 - 235311117715.6
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcD3272_10875Not AvailablePositive2353240 - 235352710062.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataD3272_10880Not AvailablePositive2353622 - 235512752524.6
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit bD3272_10885Not AvailablePositive2355138 - 235661953248.5
duf2147 domain-containing proteinD3272_10890Not AvailableNegative2357206 - 235777520488.5
Trna-serNot AvailableNot AvailablePositive2357809 - 2357902Not Available
porinD3272_10900Not AvailablePositive2358555 - 236000651447.8
hypothetical proteinD3272_10905Not AvailablePositive2360247 - 236070216333.4
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadD3272_10910Not AvailablePositive2360765 - 236182336764.5
nad(p)-dependent glycerol-3-phosphate dehydrogenaseD3272_10915Not AvailablePositive2361823 - 236281832995.9

Displaying genes 2151 – 2160 of 5287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.