Lichenibacterium ramalinae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Lichenihabitantaceae

Genus

Lichenibacterium

Description

Lichenibacterium ramalinae is a bacterial species characterized by possessing a single replicon, which indicates a streamlined genomic structure. The accession number for this species is QYBC00000000.1, providing a reference point for researchers looking to explore its genetic and functional attributes further. Lichenibacterium ramalinae is part of a broader ecological niche, often associated with lichenized fungi. This association suggests a potential role in the lichen symbiosis, possibly contributing to nutrient cycling or the degradation of organic matter. The unique relationship between Lichenibacterium ramalinae and its lichen hosts may highlight its ecological significance within these environments, although specific interactions and mechanisms remain to be fully elucidated. Understanding the genomic and ecological characteristics of Lichenibacterium ramalinae can provide insights into the complex dynamics of symbiotic relationships in lichens. Further research into this species may reveal its contributions to lichen health, stability, and resilience in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyLichenihabitantaceae
GenusLichenibacterium
SpeciesLichenibacterium ramalinae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lichenibacterium ramalinae strain RmlP001

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dead/deah box helicaseD3272_09385Not AvailableNegative2010672 - 201273275419.6
class i sam-dependent dna methyltransferaseD3272_09390Not AvailableNegative2013886 - 2016651103746.0
recombinase family proteinD3272_09395Not AvailablePositive2017198 - 201774320051.4
murein l,d-transpeptidaseD3272_09400Not AvailableNegative2018429 - 20186086405.55
hypothetical proteinD3272_09405Not AvailableNegative2019260 - 2024032170170.0
hypothetical proteinD3272_09410Not AvailableNegative2024029 - 2030844242714.0
pyrroloquinoline quinone biosynthesis protein pqqeD3272_09415Not AvailableNegative2032063 - 203315738961.6
pyrroloquinoline quinone biosynthesis protein pqqbD3272_09425Not AvailableNegative2034181 - 203507731614.0
pyrroloquinoline quinone precursor peptide pqqaD3272_09430Not AvailableNegative2035109 - 20351923065.62
sorbosone dehydrogenaseD3272_09435Not AvailablePositive2035468 - 203678147296.7

Displaying genes 1861 – 1870 of 5287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.