Lichenibacterium ramalinae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Lichenihabitantaceae

Genus

Lichenibacterium

Description

Lichenibacterium ramalinae is a bacterial species characterized by possessing a single replicon, which indicates a streamlined genomic structure. The accession number for this species is QYBC00000000.1, providing a reference point for researchers looking to explore its genetic and functional attributes further. Lichenibacterium ramalinae is part of a broader ecological niche, often associated with lichenized fungi. This association suggests a potential role in the lichen symbiosis, possibly contributing to nutrient cycling or the degradation of organic matter. The unique relationship between Lichenibacterium ramalinae and its lichen hosts may highlight its ecological significance within these environments, although specific interactions and mechanisms remain to be fully elucidated. Understanding the genomic and ecological characteristics of Lichenibacterium ramalinae can provide insights into the complex dynamics of symbiotic relationships in lichens. Further research into this species may reveal its contributions to lichen health, stability, and resilience in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyLichenihabitantaceae
GenusLichenibacterium
SpeciesLichenibacterium ramalinae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lichenibacterium ramalinae strain RmlP001

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabD3272_07805Not AvailableNegative1682712 - 168341022912.1
nifu family proteinD3272_07810Not AvailableNegative1683513 - 168408219846.6
doxx family membrane proteinD3272_07815Not AvailableNegative1684196 - 168469018359.6
type ii toxin-antitoxin system prevent-host-death family antitoxinD3272_07820Not AvailablePositive1684984 - 16852449237.01
alpha-hydroxy-acid oxidizing proteinD3272_07830Not AvailableNegative1685671 - 168710450642.6
dodecin domain-containing proteinD3272_07835Not AvailableNegative1687115 - 16873277911.39
hypothetical proteinD3272_07840Not AvailableNegative1687429 - 16876839328.86
hlyc/corc family transporterD3272_07845Not AvailableNegative1687795 - 168925252109.3
3-dehydroquinate synthaseD3272_07850Not AvailableNegative1689257 - 169040839741.5
shikimate kinaseD3272_07855Not AvailableNegative1690405 - 169105823460.3

Displaying genes 1551 – 1560 of 5287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.