Paenirhodobacter populi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Paenirhodobacter populi is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure conducive to its ecological niche. The organism is cataloged under the accession number SAUX00000000.1, which serves as a unique identifier for its genetic sequence in biological databases. This species is likely significant in its environmental context, potentially contributing to the microbial diversity and metabolic processes within its habitat. The limited number of replicons may suggest an efficient adaptation strategy, allowing Paenirhodobacter populi to thrive in specific ecological conditions. Such adaptations can be crucial for survival in competitive environments, where resource utilization and metabolic efficiency are key. Understanding Paenirhodobacter populi’s genomic features may provide insight into its role in ecological systems, especially if it engages in symbiotic or competitive interactions with other microorganisms. The single replicon may also reflect evolutionary pressures that favor streamlined genomes in certain habitats, highlighting the organism's potential adaptability and resilience in dynamic environments. Further research into its ecological role could unveil its contributions to nutrient cycling and community dynamics in its native ecosystem.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain D19-10-3-21 79, whole genome shotgun

Gene Summary

Adenine Count

793053 bp

Thymine Count

790865 bp

Guanine Count

1513753 bp

Cytosine Count

1506230 bp

Genome Length

4609931 bp

Protein-coding Genes

4130 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein tadbD2T31_10350Not AvailablePositive2149418 - 215038335137.9
type ii secretion system f family proteinD2T31_10355Not AvailablePositive2150383 - 215134235034.3
tetratricopeptide repeat proteinD2T31_10360Not AvailablePositive2151342 - 215188419202.9
hypothetical proteinD2T31_10365Not AvailablePositive2151976 - 215273127411.0
hypothetical proteinD2T31_10370Not AvailablePositive2152734 - 215323717788.4
hypothetical proteinD2T31_10375Not AvailablePositive2153312 - 21535669047.63
dna repair protein mmcb-related proteinD2T31_10380Not AvailableNegative2153550 - 215402317607.0
hypothetical proteinD2T31_10385Not AvailableNegative2154326 - 21545177157.08
transcription antitermination factor nusbD2T31_10390Not AvailableNegative2154640 - 215514318747.2
6,7-dimethyl-8-ribityllumazine synthaseD2T31_10395Not AvailableNegative2155140 - 215569119107.0

Displaying genes 2101 – 2110 of 4265 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.