Paenirhodobacter populi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Paenirhodobacter

Description

Paenirhodobacter populi is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure conducive to its ecological niche. The organism is cataloged under the accession number SAUX00000000.1, which serves as a unique identifier for its genetic sequence in biological databases. This species is likely significant in its environmental context, potentially contributing to the microbial diversity and metabolic processes within its habitat. The limited number of replicons may suggest an efficient adaptation strategy, allowing Paenirhodobacter populi to thrive in specific ecological conditions. Such adaptations can be crucial for survival in competitive environments, where resource utilization and metabolic efficiency are key. Understanding Paenirhodobacter populi’s genomic features may provide insight into its role in ecological systems, especially if it engages in symbiotic or competitive interactions with other microorganisms. The single replicon may also reflect evolutionary pressures that favor streamlined genomes in certain habitats, highlighting the organism's potential adaptability and resilience in dynamic environments. Further research into its ecological role could unveil its contributions to nutrient cycling and community dynamics in its native ecosystem.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinirhodobacter populi strain D19-10-3-21 79, whole genome shotgun

Gene Summary

Adenine Count

793053 bp

Thymine Count

790865 bp

Guanine Count

1513753 bp

Cytosine Count

1506230 bp

Genome Length

4609931 bp

Protein-coding Genes

4130 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-seryl-trna(sec) selenium transferaseD2T31_09950Not AvailableNegative2067339 - 206871547901.1
formate dehydrogenase accessory protein fdheD2T31_09955Not AvailableNegative2068715 - 206962632419.3
formate dehydrogenase subunit gammaD2T31_09960Not AvailableNegative2069661 - 207035025989.3
formate dehydrogenase subunit betaD2T31_09965Not AvailableNegative2070350 - 207134235721.4
formate dehydrogenase-n subunit alphaD2T31_09970Not AvailableNegative2071339 - 2074428114519.0
selenide, water dikinase seldD2T31_09975Not AvailablePositive2074980 - 207605636817.2
aec family transporterD2T31_09980Not AvailableNegative2076074 - 207701833018.6
mbl fold metallo-hydrolaseD2T31_09985Not AvailableNegative2077015 - 207781529535.3
tatd family deoxyribonucleaseD2T31_09990Not AvailableNegative2077812 - 207861228830.2
dna polymerase iii subunit delta'D2T31_09995Not AvailableNegative2078683 - 207976838914.0

Displaying genes 2021 – 2030 of 4265 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.