Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Gemmobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Gemmobacter |
| Species | Gemmobacter lutimaris |
| Strain | YJ-T1-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
824174 bp
Thymine Count
833542 bp
Guanine Count
1512721 bp
Cytosine Count
1490940 bp
Genome Length
4661677 bp
Protein-coding Genes
4299 genes
Non-Coding Genes
169 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | D2N39_03775 | Not Available | Negative | 782219 - 783667 | 50593.0 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | D2N39_03780 | Not Available | Negative | 783675 - 784655 | 36863.7 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | D2N39_03785 | Not Available | Negative | 784684 - 786195 | 54494.4 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | D2N39_03790 | Not Available | Negative | 786205 - 786594 | 13602.5 |
| homoprotocatechuate degradation operon regulator hpar | D2N39_03795 | Not Available | Positive | 786694 - 787155 | 17229.8 |
| yeee/yede family protein | D2N39_03800 | Not Available | Negative | 787395 - 788525 | 38108.2 |
| sulfurtransferase | D2N39_03805 | Not Available | Negative | 788525 - 789457 | 32035.8 |
| dihydroxyacetone kinase subunit dhak | D2N39_03810 | Not Available | Negative | 789784 - 791544 | 59941.8 |
| abc transporter permease | D2N39_03815 | Not Available | Negative | 791566 - 792558 | 33745.1 |
| sugar abc transporter atp-binding protein | D2N39_03820 | Not Available | Negative | 792548 - 794077 | 55358.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
