Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Gemmobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Gemmobacter |
| Species | Gemmobacter lutimaris |
| Strain | YJ-T1-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
824174 bp
Thymine Count
833542 bp
Guanine Count
1512721 bp
Cytosine Count
1490940 bp
Genome Length
4661677 bp
Protein-coding Genes
4299 genes
Non-Coding Genes
169 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly protein lptd | D2N39_00520 | Not Available | Positive | 112613 - 114775 | 79568.8 |
| peptidylprolyl isomerase | D2N39_00525 | Not Available | Positive | 114763 - 116040 | 46303.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | D2N39_00530 | Not Available | Positive | 116044 - 117021 | 33621.0 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | D2N39_00535 | Not Available | Positive | 117085 - 117924 | 30375.3 |
| duf4167 domain-containing protein | D2N39_00540 | Not Available | Negative | 117950 - 118726 | 28337.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | D2N39_00545 | Not Available | Negative | 118960 - 119793 | 28902.6 |
| peptide chain release factor 1 | D2N39_00550 | Not Available | Negative | 119790 - 120845 | 38536.0 |
| duf1499 domain-containing protein | D2N39_00555 | Not Available | Negative | 120877 - 121350 | 16821.5 |
| agmatinase | D2N39_00560 | Not Available | Negative | 121347 - 122312 | 34978.4 |
| dna starvation/stationary phase protection protein | D2N39_00565 | Not Available | Negative | 122427 - 122921 | 17974.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
