Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Gemmobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Gemmobacter |
| Species | Gemmobacter lutimaris |
| Strain | YJ-T1-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
824174 bp
Thymine Count
833542 bp
Guanine Count
1512721 bp
Cytosine Count
1490940 bp
Genome Length
4661677 bp
Protein-coding Genes
4299 genes
Non-Coding Genes
169 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | D2N39_10820 | Not Available | Negative | 2207566 - 2207916 | 13444.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | D2N39_10825 | Not Available | Positive | 2208082 - 2208921 | 29353.8 |
| pantoate--beta-alanine ligase | D2N39_10830 | Not Available | Positive | 2208918 - 2209757 | 29972.2 |
| uroporphyrinogen decarboxylase | D2N39_10835 | Not Available | Positive | 2209847 - 2210890 | 37530.0 |
| dmt family transporter | D2N39_10840 | Not Available | Positive | 2210895 - 2211797 | 31070.5 |
| plp-dependent aminotransferase family protein | D2N39_10845 | Not Available | Positive | 2211937 - 2213103 | 41845.2 |
| hypothetical protein | D2N39_10850 | Not Available | Negative | 2213197 - 2213535 | 11917.1 |
| oxygen-dependent coproporphyrinogen oxidase | D2N39_10855 | Not Available | Negative | 2213538 - 2214398 | 31777.3 |
| hypothetical protein | D2N39_10860 | Not Available | Positive | 2214513 - 2214902 | 14686.0 |
| sdr family oxidoreductase | D2N39_10865 | Not Available | Negative | 2214906 - 2215709 | 28034.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
