Sphingobium terrigena

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium terrigena is a bacterial species characterized by the presence of flagella, which indicates its motility. This trait is significant as it allows the organism to navigate its environment, potentially aiding in its survival and colonization of various niches. The species has a single replicon, suggesting a streamlined genetic structure that may facilitate efficient replication and adaptability. The genome of Sphingobium terrigena is represented in the accession QVRA00000000.1, providing a resource for further genetic and functional studies. This genomic information can be crucial for understanding the metabolic capabilities and ecological roles of Sphingobium terrigena, particularly in relation to its interactions with other microorganisms and its environment. From an ecological perspective, the motility conferred by flagella may play a role in nutrient acquisition and biofilm formation, which are essential for bacterial survival in diverse environments. The ability of Sphingobium terrigena to move towards favorable conditions or away from harmful ones enhances its adaptability, making it a potentially important player in its ecosystem. Overall, the traits of Sphingobium terrigena underline its relevance in microbial ecology, particularly in relation to its movement and genetic characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium terrigena
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium terrigena strain EO9 E09_98, whole genome shotgun

Gene Summary

Adenine Count

941241 bp

Thymine Count

935999 bp

Guanine Count

1573304 bp

Cytosine Count

1592460 bp

Genome Length

5043023 bp

Protein-coding Genes

4669 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD0Z70_11640Not AvailablePositive2457062 - 245766120585.2
duf1624 domain-containing proteinD0Z70_11645Not AvailablePositive2457685 - 245889944924.0
tonb-dependent siderophore receptorD0Z70_11650Not AvailablePositive2459215 - 246135978108.9
iron transporterD0Z70_11655Not AvailablePositive2461460 - 246250636728.7
glyoxylate/hydroxypyruvate reductase aD0Z70_11660Not AvailablePositive2462500 - 246342933453.7
haloacid dehalogenase type iiD0Z70_11665Not AvailablePositive2463589 - 246425725220.0
fad-binding oxidoreductaseD0Z70_11670Not AvailablePositive2464265 - 246554845587.3
abc transporter substrate-binding proteinD0Z70_11675Not AvailablePositive2465548 - 246708956838.3
abc transporter permeaseD0Z70_11680Not AvailablePositive2467116 - 246806933623.5
abc transporter permeaseD0Z70_11685Not AvailablePositive2468066 - 246889928770.8

Displaying genes 2291 – 2300 of 4737 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.