Sphingobium terrigena

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium terrigena is a bacterial species characterized by the presence of flagella, which indicates its motility. This trait is significant as it allows the organism to navigate its environment, potentially aiding in its survival and colonization of various niches. The species has a single replicon, suggesting a streamlined genetic structure that may facilitate efficient replication and adaptability. The genome of Sphingobium terrigena is represented in the accession QVRA00000000.1, providing a resource for further genetic and functional studies. This genomic information can be crucial for understanding the metabolic capabilities and ecological roles of Sphingobium terrigena, particularly in relation to its interactions with other microorganisms and its environment. From an ecological perspective, the motility conferred by flagella may play a role in nutrient acquisition and biofilm formation, which are essential for bacterial survival in diverse environments. The ability of Sphingobium terrigena to move towards favorable conditions or away from harmful ones enhances its adaptability, making it a potentially important player in its ecosystem. Overall, the traits of Sphingobium terrigena underline its relevance in microbial ecology, particularly in relation to its movement and genetic characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium terrigena
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium terrigena strain EO9 E09_98, whole genome shotgun

Gene Summary

Adenine Count

941241 bp

Thymine Count

935999 bp

Guanine Count

1573304 bp

Cytosine Count

1592460 bp

Genome Length

5043023 bp

Protein-coding Genes

4669 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hoxn/hupn/nixa family nickel/cobalt transporterD0Z70_05815Not AvailablePositive1225807 - 122682937015.1
cobalamin biosynthesis protein cobwD0Z70_05820Not AvailablePositive1227307 - 122834436634.0
cobaltochelatase subunit cobnD0Z70_05825Not AvailablePositive1228354 - 1231605115552.0
cobalamin biosynthesis protein cobgD0Z70_05830Not AvailablePositive1231602 - 123271138747.7
precorrin-8x methylmutaseD0Z70_05835Not AvailablePositive1232711 - 123334021626.1
precorrin-2 c(20)-methyltransferaseD0Z70_05840Not AvailablePositive1233337 - 123407426505.3
precorrin-3b c(17)-methyltransferaseD0Z70_05845Not AvailablePositive1234071 - 123482626749.3
cobalt-precorrin-6a reductaseD0Z70_05850Not AvailableNegative1234802 - 123555126224.9
precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbieD0Z70_05855Not AvailablePositive1235550 - 123674641300.9
precorrin methylaseD0Z70_05860Not AvailablePositive1236743 - 123710811988.5

Displaying genes 1141 – 1150 of 4737 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.