Emticicia sp. C21

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Leadbetterellaceae

Genus

Emticicia

Description

Emticicia sp. C21 is a Gram-negative bacterium characterized by its rod shape. This taxon features a single replicon, which is indicative of its genomic structure. The genome of Emticicia sp. C21 is represented in the public database under the accession number QVMT00000000.1. The Gram-negative nature of Emticicia sp. C21 suggests that it possesses an outer membrane containing lipopolysaccharides, which can play a role in its interaction with the environment and other organisms. The rod shape may provide advantages in motility and colonization, making it well-suited for certain ecological niches. Overall, the specific traits of Emticicia sp. C21, particularly its Gram-negative classification and rod morphology, may influence its ecological role and interactions within microbial communities. Understanding these characteristics helps in appreciating the diversity and functionality of bacteria in various environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyLeadbetterellaceae
GenusEmticicia
SpeciesEmticicia sp. C21
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Emticicia sp. C21 contig33, whole genome shotgun sequence.

Gene Summary

Adenine Count

2054638 bp

Thymine Count

2056303 bp

Guanine Count

1265584 bp

Cytosine Count

1265400 bp

Genome Length

6641932 bp

Protein-coding Genes

5364 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recx family transcriptional regulatorD0T08_15555Not AvailablePositive3784865 - 378532617942.7
hypothetical proteinD0T08_15560Not AvailableNegative3785378 - 378586617440.0
hypothetical proteinD0T08_15565Not AvailableNegative3786071 - 378655017171.3
hlyd family efflux transporter periplasmic adaptor subunitD0T08_15570Not AvailablePositive3786822 - 378792241529.1
abc transporter permeaseD0T08_15575Not AvailablePositive3787950 - 378920045421.6
abc transporter atp-binding proteinD0T08_15580Not AvailablePositive3789223 - 378989725198.4
histidine kinaseD0T08_15585Not AvailablePositive3789939 - 379092237897.4
dna-binding response regulatorD0T08_15590Not AvailablePositive3790927 - 379171230070.9
nadh-quinone oxidoreductase subunit hD0T08_15595Not AvailableNegative3791709 - 379279140415.5
asparagine--trna ligaseD0T08_15600Not AvailableNegative3792808 - 379424154551.9

Displaying genes 3081 – 3090 of 5421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.