Emticicia sp. C21

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Leadbetterellaceae

Genus

Emticicia

Description

Emticicia sp. C21 is a Gram-negative bacterium characterized by its rod shape. This taxon features a single replicon, which is indicative of its genomic structure. The genome of Emticicia sp. C21 is represented in the public database under the accession number QVMT00000000.1. The Gram-negative nature of Emticicia sp. C21 suggests that it possesses an outer membrane containing lipopolysaccharides, which can play a role in its interaction with the environment and other organisms. The rod shape may provide advantages in motility and colonization, making it well-suited for certain ecological niches. Overall, the specific traits of Emticicia sp. C21, particularly its Gram-negative classification and rod morphology, may influence its ecological role and interactions within microbial communities. Understanding these characteristics helps in appreciating the diversity and functionality of bacteria in various environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyLeadbetterellaceae
GenusEmticicia
SpeciesEmticicia sp. C21
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Emticicia sp. C21 contig33, whole genome shotgun sequence.

Gene Summary

Adenine Count

2054638 bp

Thymine Count

2056303 bp

Guanine Count

1265584 bp

Cytosine Count

1265400 bp

Genome Length

6641932 bp

Protein-coding Genes

5364 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2520 domain-containing proteinD0T08_13395Not AvailableNegative3268018 - 326881229729.8
thioredoxin family proteinD0T08_13400Not AvailablePositive3268961 - 326943118319.1
uroporphyrinogen decarboxylaseD0T08_13405Not AvailablePositive3269551 - 327057638008.7
nad-dependent epimerase/dehydratase family proteinD0T08_13410Not AvailableNegative3270636 - 327169739141.1
potassium transporter kupD0T08_13415Not AvailableNegative3271715 - 327370674947.8
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseD0T08_13420Not AvailablePositive3273891 - 327467328169.2
hypothetical proteinD0T08_13425Not AvailablePositive3274714 - 327567335690.9
duf3520 domain-containing proteinD0T08_13430Not AvailableNegative3275713 - 327759969554.7
sigma-70 family rna polymerase sigma factorD0T08_13435Not AvailablePositive3277771 - 327834622571.9
tonb family proteinD0T08_13440Not AvailablePositive3278346 - 327968348839.7

Displaying genes 2651 – 2660 of 5421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.