Emticicia sp. C21

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Leadbetterellaceae

Genus

Emticicia

Description

Emticicia sp. C21 is a Gram-negative bacterium characterized by its rod shape. This taxon features a single replicon, which is indicative of its genomic structure. The genome of Emticicia sp. C21 is represented in the public database under the accession number QVMT00000000.1. The Gram-negative nature of Emticicia sp. C21 suggests that it possesses an outer membrane containing lipopolysaccharides, which can play a role in its interaction with the environment and other organisms. The rod shape may provide advantages in motility and colonization, making it well-suited for certain ecological niches. Overall, the specific traits of Emticicia sp. C21, particularly its Gram-negative classification and rod morphology, may influence its ecological role and interactions within microbial communities. Understanding these characteristics helps in appreciating the diversity and functionality of bacteria in various environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyLeadbetterellaceae
GenusEmticicia
SpeciesEmticicia sp. C21
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Emticicia sp. C21 contig33, whole genome shotgun sequence.

Gene Summary

Adenine Count

2054638 bp

Thymine Count

2056303 bp

Guanine Count

1265584 bp

Cytosine Count

1265400 bp

Genome Length

6641932 bp

Protein-coding Genes

5364 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tail-specific proteaseD0T08_13045Not AvailableNegative3180265 - 318238279250.6
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseD0T08_13050Not AvailableNegative3182525 - 318382347489.8
hypothetical proteinD0T08_13055Not AvailableNegative3183992 - 318448318538.5
hypothetical proteinD0T08_13060Not AvailablePositive3184724 - 318610352646.9
hypothetical proteinD0T08_13065Not AvailableNegative3186104 - 318707836683.3
peptidase m14D0T08_13070Not AvailablePositive3187288 - 318860750553.5
carboxypeptidase-like regulatory domain-containing proteinD0T08_13075Not AvailablePositive3188591 - 318936429219.4
alpha-l-rhamnosidaseD0T08_13080Not AvailablePositive3189395 - 3192172104300.0
hypothetical proteinD0T08_13085Not AvailablePositive3192175 - 319277423841.0
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseD0T08_13090Not AvailablePositive3192855 - 319432153994.0

Displaying genes 2581 – 2590 of 5421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.