Emticicia sp. C21

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Leadbetterellaceae

Genus

Emticicia

Description

Emticicia sp. C21 is a Gram-negative bacterium characterized by its rod shape. This taxon features a single replicon, which is indicative of its genomic structure. The genome of Emticicia sp. C21 is represented in the public database under the accession number QVMT00000000.1. The Gram-negative nature of Emticicia sp. C21 suggests that it possesses an outer membrane containing lipopolysaccharides, which can play a role in its interaction with the environment and other organisms. The rod shape may provide advantages in motility and colonization, making it well-suited for certain ecological niches. Overall, the specific traits of Emticicia sp. C21, particularly its Gram-negative classification and rod morphology, may influence its ecological role and interactions within microbial communities. Understanding these characteristics helps in appreciating the diversity and functionality of bacteria in various environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyLeadbetterellaceae
GenusEmticicia
SpeciesEmticicia sp. C21
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Emticicia sp. C21 contig33, whole genome shotgun sequence.

Gene Summary

Adenine Count

2054638 bp

Thymine Count

2056303 bp

Guanine Count

1265584 bp

Cytosine Count

1265400 bp

Genome Length

6641932 bp

Protein-coding Genes

5364 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome oxidase subunit iiiD0T08_12430Not AvailableNegative3029321 - 302992023144.1
protoheme ix farnesyltransferaseD0T08_12435Not AvailableNegative3029943 - 303082432821.0
heme a synthaseD0T08_12440Not AvailableNegative3030824 - 303180136458.0
cytochrome c oxidase subunit iD0T08_12445Not AvailableNegative3031868 - 303374870234.7
cytochrome c oxidase subunit iiD0T08_12450Not AvailableNegative3033783 - 303492542719.8
quinol:cytochrome c oxidoreductaseD0T08_12455Not AvailableNegative3035009 - 303636151443.4
cytochrome cD0T08_12460Not AvailableNegative3036449 - 303706322931.9
duf3341 domain-containing proteinD0T08_12465Not AvailableNegative3037173 - 303769419097.1
hydrogenaseD0T08_12470Not AvailableNegative3037725 - 303910452158.9
4fe-4s dicluster domain-containing proteinD0T08_12475Not AvailableNegative3039166 - 3042219110083.0

Displaying genes 2461 – 2470 of 5421 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.