Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Leadbetterellaceae
Genus
Emticicia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Leadbetterellaceae |
| Genus | Emticicia |
| Species | Emticicia sp. C21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2054638 bp
Thymine Count
2056303 bp
Guanine Count
1265584 bp
Cytosine Count
1265400 bp
Genome Length
6641932 bp
Protein-coding Genes
5364 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | D0T08_06615 | Not Available | Negative | 1653118 - 1653990 | 33968.2 |
| protocatechuate 3,4-dioxygenase subunit beta | D0T08_06620 | Not Available | Positive | 1654407 - 1655114 | 26685.8 |
| protocatechuate 3,4-dioxygenase subunit alpha | D0T08_06625 | Not Available | Positive | 1655141 - 1655665 | 19860.5 |
| 3-carboxy-cis,cis-muconate cycloisomerase | D0T08_06630 | Not Available | Positive | 1655677 - 1656993 | 48362.7 |
| 3-oxoadipate enol-lactonase | D0T08_06635 | Not Available | Positive | 1657002 - 1658141 | 42878.3 |
| 4-hydroxybenzoate 3-monooxygenase | D0T08_06640 | Not Available | Positive | 1658128 - 1659318 | 44484.8 |
| 3-oxoacid coa-transferase subunit b | D0T08_06645 | Not Available | Positive | 1659325 - 1660671 | 46986.0 |
| 3-oxoadipyl-coa thiolase | D0T08_06650 | Not Available | Positive | 1660686 - 1661894 | 43195.3 |
| hypothetical protein | D0T08_06655 | Not Available | Positive | 1662037 - 1662558 | 20328.3 |
| hypothetical protein | D0T08_06660 | Not Available | Positive | 1662605 - 1662823 | 8368.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
