Ruegeria sp. AD91A

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria sp. AD91A is characterized by possessing two replicons, which indicates a complex genetic structure that could contribute to its adaptability and functional versatility. The organism has two distinct genomic accessions: NZ_CP031947.1 and NZ_CP031946.1. These accessions provide a basis for understanding its genetic makeup and potential metabolic capabilities. Ruegeria species are commonly associated with marine environments and are known for their roles in biogeochemical cycles, particularly in the ocean. The presence of two replicons may suggest a capacity for enhanced regulation of gene expression and metabolic processes, which could be advantageous in fluctuating environmental conditions. This genomic complexity might also play a role in the organism's ecological interactions, particularly in nutrient cycling and symbiotic relationships within marine ecosystems. Understanding Ruegeria sp. AD91A's genetic structure through its replicons and accessions can provide valuable insights into its ecological roles and potential applications in biotechnology or environmental management. Overall, the traits of Ruegeria sp. AD91A indicate a significant potential for further exploration of its ecological functions and contributions to marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria sp. AD91A
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruegeria sp. AD91A plasmid unnamed1, complete sequence.

Gene Summary

Adenine Count

161126 bp

Thymine Count

160584 bp

Guanine Count

210951 bp

Cytosine Count

210606 bp

Genome Length

743267 bp

Protein-coding Genes

656 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xanthine dehydrogenase accessory protein xdhcD1823_RS21245Not AvailablePositive626719 - 62759731502.1
xanthine/uracil/vitamin c permeaseD1823_RS21250Not AvailablePositive627641 - 62924256308.5
hydantoinase/oxoprolinase family proteinD1823_RS21255Not AvailablePositive629778 - 63187474419.2
hydantoinase b/oxoprolinase family proteinD1823_RS21260Not AvailablePositive631874 - 63353859082.7
pyridoxal phosphate-dependent aminotransferaseD1823_RS21265Not AvailablePositive633535 - 63460237059.5
asp/glu racemaseD1823_RS21270Not AvailablePositive634599 - 63533626279.7
hypothetical proteinD1823_RS21990Not AvailableNegative635499 - 6356485324.63
mmge/prpd family proteinD1823_RS21275Not AvailableNegative635667 - 63702247335.1
lysr substrate-binding domain-containing proteinD1823_RS21280Not AvailablePositive637252 - 63813933027.6
udp-glucose dehydrogenase family proteinD1823_RS21285Not AvailablePositive638666 - 63997046668.9

Displaying genes 551 – 560 of 4334 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.