Ruegeria sp. AD91A

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria sp. AD91A is characterized by possessing two replicons, which indicates a complex genetic structure that could contribute to its adaptability and functional versatility. The organism has two distinct genomic accessions: NZ_CP031947.1 and NZ_CP031946.1. These accessions provide a basis for understanding its genetic makeup and potential metabolic capabilities. Ruegeria species are commonly associated with marine environments and are known for their roles in biogeochemical cycles, particularly in the ocean. The presence of two replicons may suggest a capacity for enhanced regulation of gene expression and metabolic processes, which could be advantageous in fluctuating environmental conditions. This genomic complexity might also play a role in the organism's ecological interactions, particularly in nutrient cycling and symbiotic relationships within marine ecosystems. Understanding Ruegeria sp. AD91A's genetic structure through its replicons and accessions can provide valuable insights into its ecological roles and potential applications in biotechnology or environmental management. Overall, the traits of Ruegeria sp. AD91A indicate a significant potential for further exploration of its ecological functions and contributions to marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria sp. AD91A
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruegeria sp. AD91A plasmid unnamed1, complete sequence.

Gene Summary

Adenine Count

161126 bp

Thymine Count

160584 bp

Guanine Count

210951 bp

Cytosine Count

210606 bp

Genome Length

743267 bp

Protein-coding Genes

656 genes

Non-Coding Genes

2 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide biosynthesis/export family proteinD1823_RS07970Not AvailablePositive1589113 - 159022239072.5
capsular polysaccharide biosynthesis proteinD1823_RS07975Not AvailablePositive1590226 - 159222673696.1
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdD1823_RS07980Not AvailableNegative1592229 - 159332938709.5
transcriptional regulator nrdrD1823_RS07985Not AvailableNegative1593326 - 159379618094.6
secondary thiamine-phosphate synthase enzyme yjbqD1823_RS07990Not AvailableNegative1593917 - 159433015495.6
hypothetical proteinD1823_RS07995Not AvailableNegative1594352 - 159475614766.5
duf4166 domain-containing proteinD1823_RS08000Not AvailableNegative1594835 - 159538320034.7
thiol-disulfide oxidoreductase dcc family proteinD1823_RS08005Not AvailableNegative1595383 - 159582016308.8
helix-turn-helix domain-containing proteinD1823_RS08010Not AvailablePositive1596164 - 159720438532.3
rna polymerase sigma factor rpodD1823_RS08015Not AvailableNegative1597355 - 159934375271.2

Displaying genes 2251 – 2260 of 4334 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.