Lysobacter silvisoli

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter silvisoli is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has been identified with a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Lysobacter silvisoli is available under the accession number QTSU00000000.1. As a member of the genus Lysobacter, this bacterium is likely to exhibit unique ecological roles, particularly in soil environments where it has been isolated. Members of this genus are known for their capacity to degrade complex organic matter and may play a significant role in nutrient cycling. The Gram-negative nature of Lysobacter silvisoli suggests a particular structural composition that may influence its interactions with other microorganisms and its survival strategies in diverse habitats. This bacterium's ecological significance may extend to its potential applications in bioremediation or agriculture, given the known capabilities of Lysobacter species to suppress plant pathogens and enhance plant growth. The understanding of Lysobacter silvisoli's traits contributes to the broader knowledge of microbial diversity and functionality in soil ecosystems, highlighting its potential importance in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter silvisoli
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter silvisoli
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter silvisoli strain zong2l5 contig7, whole genome shotgun

Gene Summary

Adenine Count

700849 bp

Thymine Count

695186 bp

Guanine Count

1563954 bp

Cytosine Count

1576557 bp

Genome Length

4536546 bp

Protein-coding Genes

3874 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase inhibitor i78DX914_16865Not AvailableNegative3843988 - 384428110101.0
exonucleaseDX914_16870Not AvailableNegative3844350 - 384524632937.8
duf1998 domain-containing proteinDX914_16875Not AvailableNegative3845243 - 384767588205.6
nad(p)/fad-dependent oxidoreductaseDX914_16880Not AvailablePositive3847852 - 384953159410.4
duf938 domain-containing proteinDX914_16885Not AvailablePositive3849552 - 385019323282.9
type ii toxin-antitoxin system hipa family toxinDX914_16890Not AvailableNegative3850233 - 385153148440.7
transcriptional regulatorDX914_16895Not AvailableNegative3851531 - 385240631226.2
class a beta-lactamase-related serine hydrolaseDX914_16900Not AvailablePositive3852523 - 385428362757.2
m61 family peptidaseDX914_16905Not AvailablePositive3854417 - 385631569793.4
type ii toxin-antitoxin system hipa family toxinoxin yjjjDX914_16910Not AvailableNegative3856350 - 385773250450.8

Displaying genes 3341 – 3350 of 3931 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.