Lysobacter silvisoli

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter silvisoli is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has been identified with a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for Lysobacter silvisoli is available under the accession number QTSU00000000.1. As a member of the genus Lysobacter, this bacterium is likely to exhibit unique ecological roles, particularly in soil environments where it has been isolated. Members of this genus are known for their capacity to degrade complex organic matter and may play a significant role in nutrient cycling. The Gram-negative nature of Lysobacter silvisoli suggests a particular structural composition that may influence its interactions with other microorganisms and its survival strategies in diverse habitats. This bacterium's ecological significance may extend to its potential applications in bioremediation or agriculture, given the known capabilities of Lysobacter species to suppress plant pathogens and enhance plant growth. The understanding of Lysobacter silvisoli's traits contributes to the broader knowledge of microbial diversity and functionality in soil ecosystems, highlighting its potential importance in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter silvisoli
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter silvisoli
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter silvisoli strain zong2l5 contig7, whole genome shotgun

Gene Summary

Adenine Count

700849 bp

Thymine Count

695186 bp

Guanine Count

1563954 bp

Cytosine Count

1576557 bp

Genome Length

4536546 bp

Protein-coding Genes

3874 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2147 domain-containing proteinDX914_07015Not AvailablePositive1602312 - 160274915875.4
methionine--trna ligaseDX914_07020Not AvailablePositive1602943 - 160500974758.9
rnf electron transport complex subunit rnfbDX914_07025Not AvailablePositive1605041 - 160548115015.2
trab/gumn family proteinDX914_07030Not AvailableNegative1605644 - 160672638075.9
duf1684 domain-containing proteinDX914_07035Not AvailableNegative1606760 - 160776435710.0
dna mismatch repair endonuclease mutlDX914_07040Not AvailableNegative1607767 - 160961166997.4
n-acetylmuramoyl-l-alanine amidaseDX914_07045Not AvailableNegative1609750 - 161136355182.1
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeDX914_07050Not AvailableNegative1611451 - 161193916758.9
nad(p)h-hydrate dehydrataseDX914_07055Not AvailableNegative1611936 - 161343851335.2
trna epoxyqueuosine(34) reductase quegDX914_07060Not AvailablePositive1613518 - 161455238540.9

Displaying genes 1391 – 1400 of 3931 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.