Tannerella sp. AF04-6

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Tannerella

Description

Tannerella sp. AF04-6 is a Gram-negative bacterium distinguished by its single replicon. The organism is cataloged under the accession number QUHW00000000.1. As a member of the Tannerella genus, it is important to note that members of this group are often associated with the human oral microbiome, particularly in the context of periodontal disease. The Gram-negative classification indicates that Tannerella sp. AF04-6 possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that can influence its interactions with the host and its environment. The presence of only one replicon suggests a streamlined genetic organization, which may be advantageous for its survival and adaptability in specific niches. This trait can also provide insights into the organism's evolutionary strategies. In terms of its ecological role, Tannerella sp. AF04-6 may contribute to the microbial diversity within the oral cavity, potentially influencing health and disease states. The interplay between various microbial species, including Tannerella sp. AF04-6, can impact periodontal health, highlighting the significance of studying such bacteria to understand their roles in oral ecology and disease processes. Overall, this bacterium exemplifies the complexity of microbial communities and their potential implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusTannerella
SpeciesTannerella sp. AF04-6
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tannerella sp. AF04-6 AF04-6.Scaf135, whole genome shotgun

Gene Summary

Adenine Count

1177914 bp

Thymine Count

1164656 bp

Guanine Count

777107 bp

Cytosine Count

777843 bp

Genome Length

3897720 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3989 domain-containing proteinDWV37_14290Not AvailableNegative3410205 - 341053112516.4
conjugative transposon protein trakDWV37_14295Not AvailableNegative3410549 - 341117224324.9
conjugative transposon protein trajDWV37_14300Not AvailableNegative3411197 - 341220437249.2
duf4141 domain-containing proteinDWV37_14305Not AvailableNegative3412206 - 341283524092.0
duf3876 domain-containing proteinDWV37_14310Not AvailableNegative3412915 - 341318710221.2
trag family conjugative transposon atpaseDWV37_14315Not AvailableNegative3413194 - 341570495838.3
duf4133 domain-containing proteinDWV37_14320Not AvailableNegative3415689 - 341602412477.7
duf4134 domain-containing proteinDWV37_14325Not AvailableNegative3416054 - 341635310292.7
conjugal transfer proteinDWV37_14330Not AvailableNegative3416502 - 341722426786.5
duf3408 domain-containing proteinDWV37_14335Not AvailableNegative3417237 - 341759913938.3

Displaying genes 2791 – 2800 of 3254 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.