Tannerella sp. AF04-6

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Tannerella

Description

Tannerella sp. AF04-6 is a Gram-negative bacterium distinguished by its single replicon. The organism is cataloged under the accession number QUHW00000000.1. As a member of the Tannerella genus, it is important to note that members of this group are often associated with the human oral microbiome, particularly in the context of periodontal disease. The Gram-negative classification indicates that Tannerella sp. AF04-6 possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that can influence its interactions with the host and its environment. The presence of only one replicon suggests a streamlined genetic organization, which may be advantageous for its survival and adaptability in specific niches. This trait can also provide insights into the organism's evolutionary strategies. In terms of its ecological role, Tannerella sp. AF04-6 may contribute to the microbial diversity within the oral cavity, potentially influencing health and disease states. The interplay between various microbial species, including Tannerella sp. AF04-6, can impact periodontal health, highlighting the significance of studying such bacteria to understand their roles in oral ecology and disease processes. Overall, this bacterium exemplifies the complexity of microbial communities and their potential implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusTannerella
SpeciesTannerella sp. AF04-6
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tannerella sp. AF04-6 AF04-6.Scaf135, whole genome shotgun

Gene Summary

Adenine Count

1177914 bp

Thymine Count

1164656 bp

Guanine Count

777107 bp

Cytosine Count

777843 bp

Genome Length

3897720 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase small subunitDWV37_13500Not AvailableNegative3216063 - 321665622046.8
3-isopropylmalate dehydratase large subunitDWV37_13505Not AvailableNegative3216687 - 321809051045.2
2-isopropylmalate synthaseDWV37_13510Not AvailableNegative3218109 - 321960554421.1
hypothetical proteinDWV37_13515Not AvailableNegative3219968 - 322039015758.8
rna polymerase sigma factor rpod/sigaDWV37_13520Not AvailableNegative3220657 - 322151732638.2
do family serine endopeptidaseDWV37_13525Not AvailableNegative3221769 - 322327153529.1
yihy/virulence factor brkb family proteinDWV37_13535Not AvailablePositive3223953 - 322533252327.3
heparinaseDWV37_13540Not AvailablePositive3225417 - 322733373671.0
glycosyltransferaseDWV37_13545Not AvailablePositive3227513 - 322846035978.2
slc13 family permeaseDWV37_13550Not AvailableNegative3228795 - 323065767617.6

Displaying genes 2641 – 2650 of 3254 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.