Tannerella sp. AF04-6

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Tannerella

Description

Tannerella sp. AF04-6 is a Gram-negative bacterium distinguished by its single replicon. The organism is cataloged under the accession number QUHW00000000.1. As a member of the Tannerella genus, it is important to note that members of this group are often associated with the human oral microbiome, particularly in the context of periodontal disease. The Gram-negative classification indicates that Tannerella sp. AF04-6 possesses a thin peptidoglycan layer surrounded by an outer membrane, a characteristic that can influence its interactions with the host and its environment. The presence of only one replicon suggests a streamlined genetic organization, which may be advantageous for its survival and adaptability in specific niches. This trait can also provide insights into the organism's evolutionary strategies. In terms of its ecological role, Tannerella sp. AF04-6 may contribute to the microbial diversity within the oral cavity, potentially influencing health and disease states. The interplay between various microbial species, including Tannerella sp. AF04-6, can impact periodontal health, highlighting the significance of studying such bacteria to understand their roles in oral ecology and disease processes. Overall, this bacterium exemplifies the complexity of microbial communities and their potential implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusTannerella
SpeciesTannerella sp. AF04-6
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tannerella sp. AF04-6 AF04-6.Scaf135, whole genome shotgun

Gene Summary

Adenine Count

1177914 bp

Thymine Count

1164656 bp

Guanine Count

777107 bp

Cytosine Count

777843 bp

Genome Length

3897720 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonuclease iiiDWV37_05320Not AvailablePositive1333149 - 133379024286.7
cys-trna(pro) deacylaseDWV37_05325Not AvailableNegative1333815 - 133429117361.4
2,3-diphosphoglycerate-dependent phosphoglycerate mutaseDWV37_05330Not AvailableNegative1334335 - 133502426499.0
pap2 family proteinDWV37_05335Not AvailableNegative1335253 - 133662050534.5
trna (adenosine(37)-n6)-dimethylallyltransferase miaaDWV37_05340Not AvailableNegative1336813 - 133773336022.7
hypothetical proteinDWV37_05345Not AvailableNegative1337730 - 133886044422.5
s9 family peptidaseDWV37_05350Not AvailableNegative1339297 - 134146882448.8
nad(+) synthaseDWV37_05355Not AvailablePositive1341607 - 134353872552.2
hypothetical proteinDWV37_05360Not AvailableNegative1343584 - 134416222194.7
hypothetical proteinDWV37_05365Not AvailableNegative1344170 - 134446311096.3

Displaying genes 1041 – 1050 of 3254 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.